7OM7
Thosea asigna virus RdRP domain in complex with RNA and nucleotide UMPNPP
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C, D | RNA-dependent RNA polymerase | polymer | 684 | 77110.6 | 4 | UniProt (Q6A562) In PDB | Thosea asigna virus | |
2 | E, F, G, H, I... | RNA (5'-R(P*AP*AP*AP*UP*UP*U)-3') | polymer | 8 | 2495.5 | 8 | synthetic construct | ||
3 | A, B | 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine | non-polymer | 483.2 | 2 | Chemie (2KH) | |||
4 | A | MANGANESE (II) ION | non-polymer | 54.9 | 1 | Chemie (MN) | |||
5 | C | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 1 | Chemie (PEG) | |||
6 | water | water | 18.0 | 524 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 11 - 671 (UniProt: Q6A562)
PDB | External Database | Details |
---|---|---|
Met -12 | - | initiating methionine |
Gly -11 | - | expression tag |
Ser -10 | - | expression tag |
Ser -9 | - | expression tag |
His -8 | - | expression tag |
His -7 | - | expression tag |
His -6 | - | expression tag |
His -5 | - | expression tag |
His -4 | - | expression tag |
His -3 | - | expression tag |
Ser -2 | - | expression tag |
Gln -1 | - | expression tag |
Asp 0 | - | expression tag |
Leu 1 | - | expression tag |
Glu 2 | - | expression tag |
Asn 3 | - | expression tag |
Leu 4 | - | expression tag |
Tyr 5 | - | expression tag |
Phe 6 | - | expression tag |
Gln 7 | - | expression tag |
Gly 8 | - | expression tag |
Gly 9 | - | expression tag |
Ser 10 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 12 |
Total formula weight | 328406.8 | |
Non-Polymers* | Number of molecules | 4 |
Total formula weight | 1127.4 | |
All* | Total formula weight | 329534.2 |