7OLB
Crystal structure of Pab-AGOG, an 8-oxoguanine DNA glycosylase from Pyrococcus abyssi
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A | N-glycosylase/DNA lyase | polymer | 242 | 27982.5 | 1 | UniProt (Q9UZY0) Pfam (PF09171) In PDB | Pyrococcus abyssi (strain GE5 / Orsay) | 8-oxoguanine DNA glycosylase,AGOG,DNA-(apurinic or apyrimidinic site) lyase,AP lyase |
| 2 | A | 1,2-ETHANEDIOL | non-polymer | 62.1 | 7 | Chemie (EDO) | |||
| 3 | A | CITRIC ACID | non-polymer | 192.1 | 1 | Chemie (CIT) | |||
| 4 | A | CHLORIDE ION | non-polymer | 35.5 | 1 | Chemie (CL) | |||
| 5 | A | SODIUM ION | non-polymer | 23.0 | 2 | Chemie (NA) | |||
| 6 | water | water | 18.0 | 196 | Chemie (HOH) |
Sequence modifications
A: 1 - 239 (UniProt: Q9UZY0)
| PDB | External Database | Details |
|---|---|---|
| Gly -2 | - | expression tag |
| Ser -1 | - | expression tag |
| His 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 27982.5 | |
| Non-Polymers* | Number of molecules | 11 |
| Total formula weight | 708.0 | |
| All* | Total formula weight | 28690.5 |
