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7OIW

Structure of S. aureus Rel catalytic domains in complex with pppGpp

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
GTP pyrophosphokinasepolymer43851057.62UniProt (Q931Q4)
Pfam (PF13328)
Pfam (PF04607)
Pfam (PF02824)
Staphylococcus aureus (strain Mu50 / ATCC 700699)(p)ppGpp synthase,ATP:GTP 3'-pyrophosphotransferase,ppGpp synthase I
2C, D, O, P
(A, B)
guanosine 5'-(tetrahydrogen triphosphate) 3'-(trihydrogen diphosphate)non-polymer683.14Chemie (0O2)
3E
(A)
[[(3~{a}~{R},4~{R},6~{R},6~{a}~{R})-4-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-2-oxidanyl-2-oxidanylidene-3~{a},4,6,6~{a}-tetrahydrofuro[3,4-d][1,3,2]dioxaphosphol-6-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphatenon-polymer585.11Chemie (VF5)
4F
(A)
GLYCEROLnon-polymer92.11Chemie (GOL)
5G, Q
(A, B)
MANGANESE (II) IONnon-polymer54.92Chemie (MN)
6H, I, J
(A)
MAGNESIUM IONnon-polymer24.33Chemie (MG)
7K, L, M, N, R...
(A, B)
IODIDE IONnon-polymer126.912Chemie (IOD)
8AA, Z
(B, A)
waterwater18.055Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight102115.1
Non-Polymers*Number of molecules23
Total formula weight5115.4
All*Total formula weight107230.6
*Water molecules are not included.

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PDB entries from 2024-11-13

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