7OHU

Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down, population B

This is a non-PDB format compatible entry.

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A (1)	25S rRNA	polymer	3396	1097493.9	1		Saccharomyces cerevisiae S288C
2	B (2)	5.8S rRNA	polymer	158	50682.9	1	GenBank (940534893)	Saccharomyces cerevisiae S288c
3	C (B)	60S ribosomal protein L3	polymer	387	43850.8	1	UniProt (P14126) Pfam (PF00297)	Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)	Large ribosomal subunit protein uL3,Maintenance of killer protein 8,RP1,Trichodermin resistance protein,YL1
4	D (C)	60S ribosomal protein L4-A	polymer	362	39159.1	1	UniProt (P10664) Pfam (PF00573) Pfam (PF14374)	Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)	L2,Large ribosomal subunit protein uL4-A,RP2,YL2
5	E (E)	60S ribosomal protein L6-A	polymer	176	20000.6	1	UniProt (Q02326) Pfam (PF01159)	Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)	L17,Large ribosomal subunit protein eL6-A,RP18,YL16
6	F (F)	60S ribosomal protein L7-A	polymer	244	27686.3	1	UniProt (P05737) Pfam (PF08079) Pfam (PF00327)	Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)	L6,Large ribosomal subunit protein uL30-A,RP11,YL8
7	G (G)	60S ribosomal protein L8-A	polymer	256	28175.8	1	UniProt (P17076) Pfam (PF01248)	Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)	L4,L4-2,L7a-1,Large ribosomal subunit protein eL8-A,Maintenance of killer protein 7,RP6,YL5
8	H (H)	60S ribosomal protein L9-A	polymer	191	21605.1	1	UniProt (P05738) Pfam (PF00347)	Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)	L8,Large ribosomal subunit protein uL6-A,RP24,YL11
9	I (L)	60S ribosomal protein L13-A	polymer	199	22604.2	1	UniProt (Q12690) Pfam (PF01294)	Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)	Large ribosomal subunit protein eL13-A
10	J (M)	60S ribosomal protein L14-A	polymer	138	15195.1	1	UniProt (P36105) Pfam (PF00467) Pfam (PF01929)	Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)	Large ribosomal subunit protein eL14-A
11	K (N)	60S ribosomal protein L15-A	polymer	204	24482.4	1	UniProt (P05748) Pfam (PF00827)	Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)	L13,Large ribosomal subunit protein eL15-A,RP15R,YL10,YP18
12	L (O)	60S ribosomal protein L16-A	polymer	199	22247.2	1	UniProt (P26784) Pfam (PF00572)	Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)	L13a,L21,Large ribosomal subunit protein uL13-A,RP22,YL15
13	M (P)	60S ribosomal protein L17-A	polymer	184	20589.5	1	UniProt (P05740) Pfam (PF00237)	Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)	L20A,Large ribosomal subunit protein uL22-A,YL17
14	N (Q)	60S ribosomal protein L18-A	polymer	186	20609.3	1	UniProt (P0CX49) Pfam (PF17135)	Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)	Large ribosomal subunit protein eL18-A,RP28
15	O (S)	60S ribosomal protein L20-A	polymer	172	20478.9	1	UniProt (P0CX23) Pfam (PF01775)	Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)	L18a,Large ribosomal subunit protein eL20-A
16	P (V)	60S ribosomal protein L23-A	polymer	137	14494.0	1	UniProt (P0CX41) Pfam (PF00238)	Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)	L17a,Large ribosomal subunit protein uL14-A,YL32
17	Q (W)	Ribosome assembly factor MRT4	polymer	236	27098.0	1	UniProt (P33201) Pfam (PF00466) Pfam (PF17777)	Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)	mRNA turnover protein 4
18	R (Y)	60S ribosomal protein L26-A	polymer	127	14265.8	1	UniProt (P05743) Pfam (PF16906) Pfam (PF00467)	Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)	L33,Large ribosomal subunit protein uL24-A,YL33
19	S (b)	Nucleolar GTP-binding protein 1	polymer	647	74531.2	1	UniProt (Q02892) Pfam (PF17835) Pfam (PF06858) Pfam (PF08155)	Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
20	T (e)	60S ribosomal protein L32	polymer	130	14809.4	1	UniProt (P38061) Pfam (PF01655)	Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)	Large ribosomal subunit protein eL32
21	U (f)	60S ribosomal protein L33-A	polymer	107	12177.1	1	UniProt (P05744) Pfam (PF01247)	Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)	L37,Large ribosomal subunit protein eL33-A,RP47,YL37
22	V (h)	60S ribosomal protein L35-A	polymer	120	13942.6	1	UniProt (P0CX84) Pfam (PF00831)	Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)	Large ribosomal subunit protein uL29-A
23	W (i)	60S ribosomal protein L36-A	polymer	100	11151.3	1	UniProt (P05745) Pfam (PF01158)	Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)	L39,Large ribosomal subunit protein eL36-A,YL39
24	X (j)	60S ribosomal protein L37-A	polymer	88	9877.4	1	UniProt (P49166) Pfam (PF01907)	Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)	L43,Large ribosomal subunit protein eL37-A,YL35,YP55
25	Y (r)	Ribosome biogenesis protein NSA2	polymer	261	29786.8	1	UniProt (P40078) Pfam (PF01201)	Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)	NOP7-associated protein 2
26	Z (u)	Ribosome biogenesis protein RLP24	polymer	199	24027.7	1	UniProt (Q07915) Pfam (PF01246)	Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)	Ribosomal protein L24-like
27	AA (y)	Eukaryotic translation initiation factor 6	polymer	245	26476.6	1	UniProt (Q12522) Pfam (PF01912)	Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)	eIF-6
28	BA, CA (j, u)	ZINC ION	non-polymer		65.4	2	Chemie (ZN)

Contents of the asymmetric unit

Polymers	Number of chains	27
	Total formula weight	1747498.8
Non-Polymers*	Number of molecules	2
	Total formula weight	130.8
All*	Total formula weight	1747629.6

*Water molecules are not included.