7OHA
nucleosome with TBP and TFIIA bound at SHL +2
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, E | Histone H3.2 | polymer | 135 | 15303.9 | 2 | UniProt (P84233) Pfam (PF00125) In PDB | Xenopus laevis (African clawed frog) | |
2 | B, F | Histone H4 | polymer | 102 | 11263.2 | 2 | UniProt (P62799) Pfam (PF15511) In PDB | Xenopus laevis (African clawed frog) | |
3 | C, G | Histone H2A | polymer | 129 | 13978.2 | 2 | UniProt (Q6AZJ8) Pfam (PF00125) Pfam (PF16211) UniProt (by SIFTS) (P06897) In PDB | Xenopus laevis (African clawed frog) | |
4 | D, H | Histone H2B 1.1 | polymer | 122 | 13524.8 | 2 | UniProt (P02281) Pfam (PF00125) In PDB | Xenopus laevis (African clawed frog) | H2B1.1 |
5 | I | DNA (122-MER) | polymer | 145 | 44520.4 | 1 | synthetic construct | ||
6 | J | DNA (122-MER) | polymer | 145 | 44991.7 | 1 | synthetic construct | ||
7 | K | TATA-binding protein | polymer | 240 | 27042.3 | 1 | UniProt (G4XSG8) Pfam (PF00352) UniProt (by SIFTS) (P13393) In PDB | Saccharomyces cerevisiae (Baker's yeast) | |
8 | L | Transcription initiation factor IIA large subunit | polymer | 171 | 19432.0 | 1 | UniProt (A0A6A5Q2T8) Pfam (PF03153) UniProt (by SIFTS) (P32773) In PDB | Saccharomyces cerevisiae (Baker's yeast) | Y55_G0039490.mRNA.1.CDS.1 |
9 | M | Transcription initiation factor IIA subunit 2 | polymer | 122 | 13473.1 | 1 | UniProt (A0A6A5PRZ0) Pfam (PF02268) Pfam (PF02751) UniProt (by SIFTS) (P32774) In PDB | Saccharomyces cerevisiae (Baker's yeast) |
Sequence modifications
A, E: 1 - 135 (UniProt: P84233)
D, H: 1 - 122 (UniProt: P02281)
L: 1 - 286 (UniProt: A0A6A5Q2T8)
PDB | External Database | Details |
---|---|---|
Ala 102 | Gly 103 | conflict |
PDB | External Database | Details |
---|---|---|
Thr 29 | Ser 33 | conflict |
PDB | External Database | Details |
---|---|---|
- | Asn 95 | deletion |
- | Glu 96 | deletion |
- | Gly 97 | deletion |
- | Leu 98 | deletion |
- | Ile 99 | deletion |
- | Leu 100 | deletion |
- | Pro 101 | deletion |
- | Asn 102 | deletion |
- | Ile 103 | deletion |
- | Asn 104 | deletion |
- | Ser 105 | deletion |
- | Asn 106 | deletion |
- | Asn 107 | deletion |
- | Asn 108 | deletion |
- | Ile 109 | deletion |
- | Pro 110 | deletion |
- | His 111 | deletion |
- | Ser 112 | deletion |
- | Gly 113 | deletion |
- | Glu 114 | deletion |
- | Thr 115 | deletion |
- | Asn 116 | deletion |
- | Ile 117 | deletion |
- | Asn 118 | deletion |
- | Thr 119 | deletion |
- | Asn 120 | deletion |
- | Thr 121 | deletion |
- | Val 122 | deletion |
- | Glu 123 | deletion |
- | Ala 124 | deletion |
- | Thr 125 | deletion |
- | Asn 126 | deletion |
- | Asn 127 | deletion |
- | Ser 128 | deletion |
- | Gly 129 | deletion |
- | Ala 130 | deletion |
- | Thr 131 | deletion |
- | Leu 132 | deletion |
- | Asn 133 | deletion |
- | Thr 134 | deletion |
- | Asn 135 | deletion |
- | Thr 136 | deletion |
- | Ser 137 | deletion |
- | Gly 138 | deletion |
- | Asn 139 | deletion |
- | Thr 140 | deletion |
- | Asn 141 | deletion |
- | Ala 142 | deletion |
- | Asp 143 | deletion |
- | Val 144 | deletion |
- | Thr 145 | deletion |
- | Ser 146 | deletion |
- | Gln 147 | deletion |
- | Pro 148 | deletion |
- | Lys 149 | deletion |
- | Ile 150 | deletion |
- | Glu 151 | deletion |
- | Val 152 | deletion |
- | Lys 153 | deletion |
- | Pro 154 | deletion |
- | Glu 155 | deletion |
- | Ile 156 | deletion |
- | Glu 157 | deletion |
- | Leu 158 | deletion |
- | Thr 159 | deletion |
- | Ile 160 | deletion |
- | Asn 161 | deletion |
- | Asn 162 | deletion |
- | Ala 163 | deletion |
- | Asn 164 | deletion |
- | Ile 165 | deletion |
- | Thr 166 | deletion |
- | Thr 167 | deletion |
- | Val 168 | deletion |
- | Glu 169 | deletion |
- | Asn 170 | deletion |
- | Ile 171 | deletion |
- | Asp 172 | deletion |
- | Asp 173 | deletion |
- | Glu 174 | deletion |
- | Ser 175 | deletion |
- | Glu 176 | deletion |
- | Lys 177 | deletion |
- | Lys 178 | deletion |
- | Asp 179 | deletion |
- | Asp 180 | deletion |
- | Glu 181 | deletion |
- | Glu 182 | deletion |
- | Lys 183 | deletion |
- | Glu 184 | deletion |
- | Glu 185 | deletion |
- | Asp 186 | deletion |
- | Val 187 | deletion |
- | Glu 188 | deletion |
- | Lys 189 | deletion |
- | Thr 190 | deletion |
- | Arg 191 | deletion |
- | Lys 192 | deletion |
- | Glu 193 | deletion |
- | Lys 194 | deletion |
- | Glu 195 | deletion |
- | Gln 196 | deletion |
- | Ile 197 | deletion |
- | Glu 198 | deletion |
- | Gln 199 | deletion |
- | Val 200 | deletion |
- | Lys 201 | deletion |
- | Leu 202 | deletion |
- | Gln 203 | deletion |
- | Ala 204 | deletion |
- | Lys 205 | deletion |
- | Lys 206 | deletion |
- | Glu 207 | deletion |
- | Lys 208 | deletion |
- | Arg 209 | deletion |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 13 |
Total formula weight | 257599.7 | |
All* | Total formula weight | 257599.7 |