7O2R
Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 in complex with ITF3985
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Histone deacetylase 6 | polymer | 365 | 40342.5 | 1 | UniProt (F8W4B7) Pfam (PF00850) In PDB | Danio rerio (Zebrafish Brachydanio rerio) | |
2 | A | 3,5-bis(fluoranyl)-~{N}-oxidanyl-4-[(5-pyrimidin-2-yl-1,2,3,4-tetrazol-2-yl)methyl]benzamide | non-polymer | 333.3 | 1 | Chemie (V05) | |||
3 | A | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
4 | A | IODIDE ION | non-polymer | 126.9 | 6 | Chemie (IOD) | |||
5 | A | POTASSIUM ION | non-polymer | 39.1 | 2 | Chemie (K) | |||
6 | A | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 1 | Chemie (PEG) | |||
7 | water | water | 18.0 | 97 | Chemie (HOH) |
Sequence modifications
A: 440 - 798 (UniProt: F8W4B7)
PDB | External Database | Details |
---|---|---|
Gly 434 | - | cloning artifact |
Ser 435 | - | cloning artifact |
Asn 436 | - | cloning artifact |
Ala 437 | - | cloning artifact |
Gly 438 | - | cloning artifact |
Gly 439 | - | cloning artifact |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 1 |
Total formula weight | 40342.5 | |
Non-Polymers* | Number of molecules | 11 |
Total formula weight | 1344.4 | |
All* | Total formula weight | 41686.9 |