7NXQ
Structure of the pentameric C-terminal domain of the capsid protein from Kaposi's sarcoma-associated herpesvirus (KSHV)
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C, D, E... | Capsid vertex component 2 | polymer | 443 | 49064.0 | 10 | UniProt (Q76RI7) Pfam (PF01499) UniProt (by SIFTS) (Q2HRB3) In PDB | Human herpesvirus 8 | |
2 | I, J, A, B, C... | ACETATE ION | non-polymer | 59.0 | 20 | Chemie (ACT) | |||
3 | water | water | 18.0 | 1980 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E, F, G, H, I, J: 123 - 549 (UniProt: Q76RI7)
PDB | External Database | Details |
---|---|---|
Met 122 | - | initiating methionine |
Pro 550 | - | expression tag |
Ala 551 | - | expression tag |
Ala 552 | - | expression tag |
Ala 553 | - | expression tag |
Leu 554 | - | expression tag |
Glu 555 | - | expression tag |
His 556 | - | expression tag |
His 557 | - | expression tag |
His 558 | - | expression tag |
His 559 | - | expression tag |
His 560 | - | expression tag |
His 561 | - | expression tag |
His 562 | - | expression tag |
His 563 | - | expression tag |
His 564 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 10 |
Total formula weight | 490640.4 | |
Non-Polymers* | Number of molecules | 20 |
Total formula weight | 1180.9 | |
All* | Total formula weight | 491821.2 |