7NSH
39S mammalian mitochondrial large ribosomal subunit with mtRRF (post) and mtEFG2
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (B0) | Mitochondrial ribosomal protein L27 | polymer | 148 | 15943.7 | 1 | UniProt (F1RT79) Pfam (PF01016) UniProt (by SIFTS) (A0A4X1U0F6) | Sus scrofa (Pig) | |
| 2 | B (BY) | uL24m | polymer | 216 | 24893.5 | 1 | UniProt (F1RHJ1) Pfam (PF00467) Pfam (PF17136) | Sus scrofa (Pig) | |
| 3 | C (Ba) | Mitochondrial ribosomal protein L37 | polymer | 423 | 47918.0 | 1 | UniProt (A0A287BIV6) Pfam (PF07147) | Sus scrofa (Pig) | |
| 4 | D (B8) | Mitochondrial ribosomal protein L35 | polymer | 188 | 21548.5 | 1 | UniProt (F1SVC5) | Sus scrofa (Pig) | |
| 5 | E (Bb) | Mitochondrial ribosomal protein L38 | polymer | 380 | 44656.4 | 1 | UniProt (F1RW03) Pfam (PF01161) | Sus scrofa (Pig) | |
| 6 | F (Bc) | Mitochondrial ribosomal protein L39 | polymer | 334 | 38523.4 | 1 | UniProt (F1SHP6) | Sus scrofa (Pig) | |
| 7 | G (Bd) | Mitochondrial ribosomal protein L40 | polymer | 206 | 24075.7 | 1 | UniProt (A0A5G2R2V2) Pfam (PF09812) | Sus scrofa (Pig) | |
| 8 | H (Be) | Mitochondrial ribosomal protein L41 | polymer | 135 | 15073.4 | 1 | UniProt (A0A287AWS0) Pfam (PF09809) UniProt (by SIFTS) (A0A8D1F1K9) | Sus scrofa (Pig) | |
| 9 | I (Bf) | mL42 | polymer | 142 | 16680.2 | 1 | UniProt (A0A287BQA1) Pfam (PF10210) | Sus scrofa (Pig) | |
| 10 | J (Bg) | Mitochondrial ribosomal protein L43 | polymer | 159 | 17728.1 | 1 | UniProt (F1S8U4) Pfam (PF05047) | Sus scrofa (Pig) | |
| 11 | K (Bh) | mL44 | polymer | 332 | 37527.2 | 1 | UniProt (F1SR64) Pfam (PF22935) Pfam (PF22892) | Sus scrofa (Pig) | |
| 12 | L (Bi) | Mitochondrial ribosomal protein L45 | polymer | 306 | 35331.8 | 1 | UniProt (I3LGM5) Pfam (PF04280) | Sus scrofa (Pig) | |
| 13 | M (Bj) | Mitochondrial ribosomal protein L46 | polymer | 279 | 32216.0 | 1 | UniProt (F1SRT0) Pfam (PF11788) | Sus scrofa (Pig) | |
| 14 | N (Bk) | 39S ribosomal protein L48, mitochondrial | polymer | 269 | 29942.5 | 1 | UniProt (A0A480J9Z6) Pfam (PF00338) | Sus scrofa (Pig) | 39S ribosomal protein L48,mitochondrial isoform 1,Mitochondrial ribosomal protein L48 |
| 15 | O (Bl) | Mrpl34 | polymer | 166 | 18957.8 | 1 | UniProt (A0A0R4J8D6) Pfam (PF05046) | Sus scrofa (Pig) | |
| 16 | P (Bm) | Mitochondrial ribosomal protein L50 | polymer | 198 | 22785.4 | 1 | UniProt (I3L9H6) Pfam (PF10501) | Sus scrofa (Pig) | |
| 17 | Q (Bn) | Mitochondrial ribosomal protein L51 | polymer | 128 | 15249.0 | 1 | UniProt (A0A287BE26) Pfam (PF10244) UniProt (by SIFTS) (A0A8D1P1C8) | Sus scrofa (Pig) | |
| 18 | R (Bo) | mL52 | polymer | 124 | 13813.7 | 1 | UniProt (F1S9B7) Pfam (PF18699) | Sus scrofa (Pig) | |
| 19 | S (Bp) | mL53 | polymer | 112 | 12015.7 | 1 | UniProt (A0A341D604) Pfam (PF10780) | Sus scrofa (Pig) | |
| 20 | T (Bq) | mL54 | polymer | 138 | 15957.4 | 1 | UniProt (I3LN63) Pfam (PF08561) | Sus scrofa (Pig) | |
| 21 | U (Bt) | Mitochondrial ribosomal protein L57 | polymer | 102 | 12001.9 | 1 | UniProt (A0A287BP93) Pfam (PF14978) | Sus scrofa (Pig) | |
| 22 | V (Bu) | mL62 (ICT1) | polymer | 205 | 23545.9 | 1 | UniProt (A0A286ZJR2) Pfam (PF00472) | Sus scrofa (Pig) | |
| 23 | W (Bv) | mL64 | polymer | 222 | 25815.0 | 1 | UniProt (A0A286ZXA6) Pfam (PF10147) | Sus scrofa (Pig) | |
| 24 | X (Bw) | 39S ribosomal protein S30, mitochondrial | polymer | 433 | 49100.5 | 1 | UniProt (A0A480QIM3) Pfam (PF07147) | Sus scrofa (Pig) | Mitochondrial ribosomal protein S30 |
| 25 | Y (Bx) | Mitochondrial ribosomal protein S18A | polymer | 196 | 22273.1 | 1 | UniProt (F1RRH6) Pfam (PF01084) | Sus scrofa (Pig) | |
| 26 | BA, CA, DA, FA, GA... (CL, DL, EL, FL, GL...) | Mitochondrial ribosomal protein L12 | polymer | 198 | 21269.0 | 7 | UniProt (A0A287ARV8) Pfam (PF16320) Pfam (PF00542) UniProt (by SIFTS) (A0A4X1U6S6) | Sus scrofa (Pig) | |
| 27 | AA (B1) | Mitochondrial ribosomal protein L28 | polymer | 256 | 30149.0 | 1 | UniProt (A0A286ZTW8) Pfam (PF00830) | Sus scrofa (Pig) | |
| 28 | EA (B9) | Ribosomal protein | polymer | 100 | 10841.0 | 1 | UniProt (A0A287A731) Pfam (PF00444) | Sus scrofa (Pig) | |
| 29 | HA (BA) | 16S rRNA | polymer | 1571 | 504852.0 | 1 | GenBank (33320725) | Sus scrofa (Pig) | |
| 30 | IA (B2) | Mitochondrial ribosomal protein L47 | polymer | 252 | 30085.1 | 1 | UniProt (F1SGC7) Pfam (PF06984) | Sus scrofa (Pig) | |
| 31 | JA (B3) | uL30m | polymer | 161 | 18921.1 | 1 | UniProt (F1STE5) Pfam (PF00327) UniProt (by SIFTS) (A0A8D1MIP3) | Sus scrofa (Pig) | |
| 32 | KA (B4) | bL31m | polymer | 126 | 15156.5 | 1 | UniProt (I3L9J0) Pfam (PF09776) UniProt (by SIFTS) (A0A4X1ULI6) | Sus scrofa (Pig) | |
| 33 | LA (B5) | bL32m | polymer | 188 | 21537.9 | 1 | UniProt (I3LTC4) Pfam (PF01783) | Sus scrofa (Pig) | |
| 34 | MA (B6) | bL33m | polymer | 65 | 7508.1 | 1 | UniProt (A0A286ZU68) Pfam (PF00471) UniProt (by SIFTS) (A0A4X1TLP9) | Sus scrofa (Pig) | |
| 35 | NA (B7) | Mitochondrial ribosomal protein L34 | polymer | 95 | 10871.7 | 1 | UniProt (A0A287A119) Pfam (PF00468) UniProt (by SIFTS) (A0A4X1UFR4) | Sus scrofa (Pig) | |
| 36 | OA (BB) | CP tRNAPhe | polymer | 73 | 23402.0 | 1 | GenBank (76262549) | Sus scrofa (Pig) | |
| 37 | PA (BC) | Ribosome-releasing factor 2, mitochondrial | polymer | 755 | 83848.7 | 1 | UniProt (Q969S9) Pfam (PF00009) Pfam (PF22042) Pfam (PF14492) Pfam (PF03764) Pfam (PF00679) | Homo sapiens (Human) | RRF2mt,Elongation factor G 2,mitochondrial,EF-G2mt,mEF-G 2,Elongation factor G2,hEFG2 |
| 38 | QA (BD) | uL2m | polymer | 306 | 33270.9 | 1 | UniProt (F1RRN2) Pfam (PF00181) | Sus scrofa (Pig) | |
| 39 | RA (BG) | Ribosome-recycling factor, mitochondrial | polymer | 257 | 28690.0 | 1 | UniProt (Q96E11) Pfam (PF01765) | Homo sapiens (Human) | RRF,Ribosome-releasing factor,mitochondrial |
| 40 | SA (BQ) | uL16m | polymer | 251 | 28680.5 | 1 | UniProt (F1RI89) Pfam (PF00252) | Sus scrofa (Pig) | |
| 41 | UA (BE) | ICT1 | polymer | 399 | 43708.3 | 1 | UniProt (A0A140UHW4) Pfam (PF00297) | Sus scrofa (Pig) | Mitochondrial ribosomal protein L3 |
| 42 | VA (BF) | Mitochondrial ribosomal protein L4 | polymer | 294 | 33251.5 | 1 | UniProt (A0A287B9C4) Pfam (PF00573) | Sus scrofa (Pig) | |
| 43 | WA (BI) | Mitochondrial ribosomal protein L9 | polymer | 268 | 30373.4 | 1 | UniProt (I3LR45) Pfam (PF01281) Pfam (PF22078) | Sus scrofa (Pig) | |
| 44 | XA (BJ) | Mitochondrial ribosomal protein L10 | polymer | 262 | 29449.7 | 1 | UniProt (F1RWJ0) Pfam (PF00466) | Sus scrofa (Pig) | |
| 45 | YA (BK) | Mitochondrial ribosomal protein L11 | polymer | 192 | 20809.3 | 1 | UniProt (F1RU54) Pfam (PF00298) | Sus scrofa (Pig) | |
| 46 | ZA (BN) | uL13m | polymer | 178 | 20633.8 | 1 | UniProt (K7GP19) Pfam (PF00572) | Sus scrofa (Pig) | |
| 47 | AB (BO) | uL14m | polymer | 145 | 15955.6 | 1 | UniProt (A0A287BMZ6) Pfam (PF00238) | Sus scrofa (Pig) | |
| 48 | BB (BP) | uL15m | polymer | 296 | 33481.7 | 1 | UniProt (F1RSH0) | Sus scrofa (Pig) | |
| 49 | CB (BR) | bL17m | polymer | 169 | 19268.2 | 1 | UniProt (F1RMQ4) Pfam (PF01196) | Sus scrofa (Pig) | |
| 50 | DB (BS) | Mitochondrial ribosomal protein L18 | polymer | 180 | 20582.6 | 1 | UniProt (A0A286ZNK1) Pfam (PF00861) | Sus scrofa (Pig) | |
| 51 | EB (BT) | Mitochondrial ribosomal protein L19 | polymer | 292 | 33441.5 | 1 | UniProt (I3LNJ0) Pfam (PF01245) | Sus scrofa (Pig) | |
| 52 | FB (BU) | Mitochondrial ribosomal protein L20 | polymer | 149 | 17554.8 | 1 | UniProt (A0A286ZU56) Pfam (PF00453) | Sus scrofa (Pig) | |
| 53 | GB (BV) | Mitochondrial ribosomal protein L21 | polymer | 209 | 23154.9 | 1 | UniProt (F1RY70) Pfam (PF00829) | Sus scrofa (Pig) | |
| 54 | HB (BW) | uL22m | polymer | 210 | 24313.4 | 1 | UniProt (F1RQC9) Pfam (PF00237) UniProt (by SIFTS) (A0A4X1TXR4) | Sus scrofa (Pig) | |
| 55 | IB (BX) | uL23m | polymer | 150 | 17643.2 | 1 | UniProt (A0A286ZZC6) | Sus scrofa (Pig) | |
| 56 | AC, AD, AE, AF, AG... (BA, BJ, BP, BR, B0...) | MAGNESIUM ION | non-polymer | 24.3 | 221 | Chemie (MG) | |||
| 57 | OB, PB, SJ (Bx, B9, B5) | ZINC ION | non-polymer | 65.4 | 3 | Chemie (ZN) | |||
| 58 | NJ, OJ (BA) | GUANOSINE-5'-MONOPHOSPHATE | non-polymer | 363.2 | 2 | Chemie (5GP) | |||
| 59 | PJ, QJ (BA) | SPERMINE | non-polymer | 202.3 | 2 | Chemie (SPM) | |||
| 60 | TJ (BC) | PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER | non-polymer | 522.2 | 1 | Chemie (GNP) | |||
| 61 | EK (BC) | water | water | 18.0 | 2 | Chemie (HOH) |
Sequence modifications
Bl: 1 - 166 (UniProt: A0A0R4J8D6)
Bp: 1 - 112 (UniProt: A0A341D604)
BB: 1 - 73 (GenBank: 76262549)
BC: 45 - 779 (UniProt: Q969S9)
BG: 26 - 262 (UniProt: Q96E11)
BQ: 1 - 251 (UniProt: F1RI89)
| PDB | External Database | Details |
|---|---|---|
| Arg 59 | Lys 59 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Ala 12 | Ser 12 | conflict |
| Ser 107 | Gly 107 | conflict |
| PDB | External Database | Details |
|---|---|---|
| C 71 | - | insertion |
| PDB | External Database | Details |
|---|---|---|
| Met 25 | - | initiating methionine |
| His 26 | - | expression tag |
| His 27 | - | expression tag |
| His 28 | - | expression tag |
| His 29 | - | expression tag |
| His 30 | - | expression tag |
| His 31 | - | expression tag |
| Glu 32 | - | expression tag |
| Asn 33 | - | expression tag |
| Leu 34 | - | expression tag |
| Tyr 35 | - | expression tag |
| Phe 36 | - | expression tag |
| Gln 37 | - | expression tag |
| Ser 38 | - | expression tag |
| Gly 39 | - | expression tag |
| Gly 40 | - | expression tag |
| Ser 41 | - | expression tag |
| Gly 42 | - | expression tag |
| Ser 43 | - | expression tag |
| Gly 44 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Met 6 | - | initiating methionine |
| His 7 | - | expression tag |
| His 8 | - | expression tag |
| His 9 | - | expression tag |
| His 10 | - | expression tag |
| His 11 | - | expression tag |
| His 12 | - | expression tag |
| Glu 13 | - | expression tag |
| Asn 14 | - | expression tag |
| Leu 15 | - | expression tag |
| Tyr 16 | - | expression tag |
| Phe 17 | - | expression tag |
| Gln 18 | - | expression tag |
| Ser 19 | - | expression tag |
| Gly 20 | - | expression tag |
| Gly 21 | - | expression tag |
| Ser 22 | - | expression tag |
| Gly 23 | - | expression tag |
| Ser 24 | - | expression tag |
| Gly 25 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| His 237 | Tyr 237 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 61 |
| Total formula weight | 2013893.1 | |
| Non-Polymers* | Number of molecules | 229 |
| Total formula weight | 7220.9 | |
| All* | Total formula weight | 2021114.0 |
