7MZG
SARS-CoV-2 receptor binding domain bound to Fab PDI 42
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (H) | PDI 42 heavy chain | polymer | 220 | 23171.9 | 1 | Homo sapiens (human) | ||
| 2 | B (L) | PDI 42 light chain | polymer | 216 | 23472.0 | 1 | Homo sapiens (human) | ||
| 3 | C (A) | Spike protein S1 | polymer | 205 | 23073.8 | 1 | UniProt (P0DTC2) Pfam (PF09408) | Severe acute respiratory syndrome coronavirus 2 (2019-nCoV SARS-CoV-2) | |
| 4 | D (B) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 570.5 | 1 | In PDB GlyTouCan (G21290RB) | |||
| 5 | E, F, G, H, I... (H, L, A) | GLYCEROL | non-polymer | 92.1 | 6 | Chemie (GOL) | |||
| 6 | K, L, M (H, L, A) | water | water | 18.0 | 456 | Chemie (HOH) |
Sequence modifications
A: 331 - 527 (UniProt: P0DTC2)
| PDB | External Database | Details |
|---|---|---|
| Gly 528 | - | expression tag |
| Ser 529 | - | expression tag |
| His 530 | - | expression tag |
| His 531 | - | expression tag |
| His 532 | - | expression tag |
| His 533 | - | expression tag |
| His 534 | - | expression tag |
| His 535 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 69717.7 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 570.5 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 552.6 | |
| All* | Total formula weight | 70840.8 |
