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7MSV

Solution Structure of Berberine Bound to a dGMP Fill-in G-Quadruplex in the PDGFR-b Promoter

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(X)
DNA (5'-D(*AP*AP*GP*GP*GP*AP*GP*GP*GP*CP*GP*GP*CP*GP*GP*GP*AP*CP*A)-3')polymer196009.91Homo sapiens
2B
(X)
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATEnon-polymer347.21Chemie (DGP)
PubChem (135398597)
PubChem (135402021)
PubChem (135596592)
PubChem (135699677)
PubChem (135794130)
PubChem (135873587)
PubChem (135873588)
PubChem (135925427)
PubChem (135933899)
PubChem (136093899)
PubChem (136269908)
PubChem (136847913)
PubChem (137226753)
PubChem (137257916)
3C, D
(X)
BERBERINEnon-polymer336.42Chemie (BER)
PubChem (2353)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight6009.9
Non-Polymers*Number of molecules3
Total formula weight1019.9
All*Total formula weight7029.8
*Water molecules are not included.

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PDB entries from 2026-05-13

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