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7MMS

Crystal Structure of the Class Ie Ribonucleotide Reductase Beta-NrdI complex from Aerococcus urinae in Semiquinone Form with Cu(I) bound

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, DRibonucleoside-diphosphate reductasepolymer34239321.04UniProt (F2I8X9)
Pfam (PF00268)
In PDB
Aerococcus urinae (strain ACS-120-V-Col10a)
2E, G, F, HProtein NrdIpolymer14716486.54UniProt (A0A178HGH7)
Pfam (PF07972)
UniProt (by SIFTS) (F2I8Y0)
In PDB
Aerococcus urinae
3A, B, CCOPPER (I) IONnon-polymer63.54Chemie (CU1)
4F, A, B, C, D...GLYCEROLnon-polymer92.19Chemie (GOL)
5A, B, CCALCIUM IONnon-polymer40.13Chemie (CA)
6H, E, G, F1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOLnon-polymer458.44Chemie (FNR)
7waterwater18.0604Chemie (HOH)
Sequence modifications
A, B, C, D: 1 - 337 (UniProt: F2I8X9)
PDBExternal DatabaseDetails
Ser -4-expression tag
Asn -3-expression tag
Ile -2-expression tag
Leu -1-expression tag
Glu 0-expression tag
E, G, F, H: 1 - 142 (UniProt: A0A178HGH7)
PDBExternal DatabaseDetails
Ser -4-expression tag
Asn -3-expression tag
Ile -2-expression tag
Leu -1-expression tag
Glu 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains8
Total formula weight223229.8
Non-Polymers*Number of molecules20
Total formula weight3036.7
All*Total formula weight226266.5
*Water molecules are not included.

219869

PDB entries from 2024-05-15

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