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7MMS

Crystal Structure of the Class Ie Ribonucleotide Reductase Beta-NrdI complex from Aerococcus urinae in Semiquinone Form with Cu(I) bound

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(A, B, C, D)
Ribonucleoside-diphosphate reductasepolymer34239321.04UniProt (F2I8X9)
Pfam (PF00268)
Aerococcus urinae (strain ACS-120-V-Col10a)
2E, F, G, H
(E, G, F, H)
Protein NrdIpolymer14716486.54UniProt (A0A178HGH7)
Pfam (PF07972)
UniProt (by SIFTS) (F2I8Y0)
Aerococcus urinae
3I, M, Q, S
(A, B, C)
COPPER (I) IONnon-polymer63.54Chemie (CU1)
4AA, J, K, N, O...
(F, A, B, C, D...)
GLYCEROLnon-polymer92.19Chemie (GOL)
5L, P, T
(A, B, C)
CALCIUM IONnon-polymer40.13Chemie (CA)
6BA, V, X, Z
(H, E, G, F)
1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOLnon-polymer458.44Chemie (FNR)
7CA, DA, EA, FA, GA...
(A, B, C, D, E...)
waterwater18.0604Chemie (HOH)
Sequence modifications
A, B, C, D: 1 - 337 (UniProt: F2I8X9)
PDBExternal DatabaseDetails
Ser -4-expression tag
Asn -3-expression tag
Ile -2-expression tag
Leu -1-expression tag
Glu 0-expression tag
E, G, F, H: 1 - 142 (UniProt: A0A178HGH7)
PDBExternal DatabaseDetails
Ser -4-expression tag
Asn -3-expression tag
Ile -2-expression tag
Leu -1-expression tag
Glu 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains8
Total formula weight223229.8
Non-Polymers*Number of molecules20
Total formula weight3036.7
All*Total formula weight226266.5
*Water molecules are not included.

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PDB entries from 2025-07-30

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