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7MED

CDD-1 beta-lactamase in imidazole/MPD 5 minute avibactam complex

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Beta-lactamasepolymer25028617.21UniProt (A0A160YKM3)Clostridioides difficile (Peptoclostridium difficile)CDD-1 beta-lactamase
2B
(A)
(2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamidenon-polymer267.31Chemie (NXL)
3C
(A)
CARBON DIOXIDEnon-polymer44.01Chemie (CO2)
4D, E, F, G
(A)
SULFATE IONnon-polymer96.14Chemie (SO4)
5H
(A)
(4S)-2-METHYL-2,4-PENTANEDIOLnon-polymer118.21Chemie (MPD)
6I
(A)
waterwater18.0149Chemie (HOH)
Sequence modifications
A: 60 - 309 (UniProt: A0A160YKM3)
PDBExternal DatabaseDetails
Ala 238Lys 238engineered mutation
Ala 244Lys 244engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight28617.2
Non-Polymers*Number of molecules7
Total formula weight813.7
All*Total formula weight29430.9
*Water molecules are not included.

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PDB entries from 2024-11-06

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