Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Ribosomal protein L8 | polymer | 257 | 28088.9 | 1 | UniProt (G1TT27) Pfam (PF00181) Pfam (PF03947) In PDB | Oryctolagus cuniculus (Rabbit) | |
2 | B | uL3 | polymer | 403 | 46108.0 | 1 | UniProt (G1TL06) Pfam (PF00297) In PDB | Oryctolagus cuniculus (Rabbit) | |
3 | C | 60S ribosomal protein L4 | polymer | 425 | 47727.6 | 1 | UniProt (G1SVW5) Pfam (PF00573) Pfam (PF14374) In PDB | Oryctolagus cuniculus (Rabbit) | |
4 | D | Ribosomal_L18_c domain-containing protein | polymer | 297 | 34481.8 | 1 | UniProt (G1SYJ6) UniProt (by SIFTS) (P19949) In PDB | Oryctolagus cuniculus (Rabbit) | |
5 | E | 60S ribosomal protein L6 | polymer | 291 | 33028.3 | 1 | UniProt (G1SKF7) Pfam (PF03868) Pfam (PF01159) In PDB | Oryctolagus cuniculus (Rabbit) | |
6 | F | 60S ribosomal protein L7 | polymer | 247 | 29201.8 | 1 | UniProt (G1TUB1) Pfam (PF08079) Pfam (PF00327) In PDB | Oryctolagus cuniculus (Rabbit) | |
7 | G | 60S ribosomal protein L7a | polymer | 319 | 36221.5 | 1 | UniProt (G1STW0) Pfam (PF01248) In PDB | Oryctolagus cuniculus (Rabbit) | |
8 | H | 60S ribosomal protein L9 | polymer | 192 | 21871.4 | 1 | UniProt (G1SWI6) Pfam (PF00347) In PDB | Oryctolagus cuniculus (Rabbit) | |
9 | I | 60S ribosomal protein L10 | polymer | 214 | 24643.1 | 1 | UniProt (B7NZQ2) Pfam (PF00252) In PDB | Oryctolagus cuniculus (Rabbit) | |
10 | J | 60S ribosomal protein L11 | polymer | 178 | 20288.5 | 1 | UniProt (G1TUB8) Pfam (PF00281) Pfam (PF00673) In PDB | Oryctolagus cuniculus (Rabbit) | |
11 | L | 60S ribosomal protein L13 | polymer | 211 | 24331.7 | 1 | UniProt (G1TPV0) In PDB | Oryctolagus cuniculus (Rabbit) | |
12 | M | 60S ribosomal protein L14 | polymer | 218 | 23870.5 | 1 | UniProt (G1SZ12) Pfam (PF01929) In PDB | Oryctolagus cuniculus (Rabbit) | |
13 | N | Ribosomal protein L15 | polymer | 204 | 24207.3 | 1 | UniProt (G1T0C1) Pfam (PF00827) In PDB | Oryctolagus cuniculus (Rabbit) | |
14 | O | uL13 | polymer | 203 | 23533.3 | 1 | Oryctolagus cuniculus | ||
15 | P | uL22 | polymer | 184 | 21444.2 | 1 | UniProt (G1TVT6) Pfam (PF00237) UniProt (by SIFTS) (G1SCJ6) In PDB | Oryctolagus cuniculus (Rabbit) | |
16 | Q | Ribosomal protein L18 | polymer | 188 | 21699.7 | 1 | UniProt (G1TFE0) Pfam (PF17135) In PDB | Oryctolagus cuniculus (Rabbit) | |
17 | R | Ribosomal protein L19 | polymer | 196 | 23535.3 | 1 | UniProt (G1TJR3) Pfam (PF01280) In PDB | Oryctolagus cuniculus (Rabbit) | |
18 | S | 60S ribosomal protein L18a | polymer | 176 | 20827.6 | 1 | UniProt (G1TTY7) Pfam (PF01775) In PDB | Oryctolagus cuniculus (Rabbit) | |
19 | T | eL21 | polymer | 160 | 18610.0 | 1 | UniProt (G1SHQ2) Pfam (PF01157) In PDB | Oryctolagus cuniculus (Rabbit) | |
20 | U | eL22 | polymer | 128 | 14813.0 | 1 | UniProt (G1TSG1) Pfam (PF01776) In PDB | Oryctolagus cuniculus (Rabbit) | |
21 | V | Ribosomal protein L23 | polymer | 140 | 14892.5 | 1 | UniProt (G1T6D1) Pfam (PF00238) In PDB | Oryctolagus cuniculus (Rabbit) | |
22 | W | 60S ribosomal protein L24 | polymer | 157 | 17825.1 | 1 | UniProt (G1SE28) Pfam (PF01246) In PDB | Oryctolagus cuniculus (Rabbit) | |
23 | X | eL23 | polymer | 156 | 17768.2 | 1 | UniProt (G1SE76) Pfam (PF03939) Pfam (PF00276) In PDB | Oryctolagus cuniculus (Rabbit) | |
24 | Y | uL24 | polymer | 145 | 17303.4 | 1 | UniProt (G1SQH0) Pfam (PF16906) Pfam (PF00467) In PDB | Oryctolagus cuniculus (Rabbit) | |
25 | Z | 60S ribosomal protein L27 | polymer | 136 | 15835.8 | 1 | UniProt (G1TXF6) Pfam (PF00467) Pfam (PF01777) In PDB | Oryctolagus cuniculus (Rabbit) | |
26 | a | 60S ribosomal protein L27a | polymer | 148 | 16620.6 | 1 | UniProt (G1SNY0) Pfam (PF00828) In PDB | Oryctolagus cuniculus (Rabbit) | |
27 | b | 60S ribosomal protein L29 | polymer | 245 | 26708.7 | 1 | UniProt (G1SGR6) Pfam (PF01779) In PDB | Oryctolagus cuniculus (Rabbit) | |
28 | c | eL30 | polymer | 115 | 12807.1 | 1 | UniProt (G1TDL2) Pfam (PF01248) In PDB | Oryctolagus cuniculus (Rabbit) | |
29 | d | eL31 | polymer | 125 | 14494.9 | 1 | UniProt (G1SHG0) Pfam (PF01198) In PDB | Oryctolagus cuniculus (Rabbit) | |
30 | e | eL32 | polymer | 135 | 15898.9 | 1 | UniProt (G1U437) Pfam (PF01655) UniProt (by SIFTS) (G1TUN8) In PDB | Oryctolagus cuniculus (Rabbit) | |
31 | f | eL33 | polymer | 110 | 12580.8 | 1 | UniProt (G1SF08) Pfam (PF01247) In PDB | Oryctolagus cuniculus (Rabbit) | |
32 | g | 60S ribosomal protein L34 | polymer | 116 | 13196.9 | 1 | UniProt (G1U945) Pfam (PF01199) UniProt (by SIFTS) (G1TXG5) In PDB | Oryctolagus cuniculus (Rabbit) | |
33 | h | eL35 | polymer | 123 | 14566.6 | 1 | UniProt (G1SIT5) Pfam (PF00831) In PDB | Oryctolagus cuniculus (Rabbit) | |
34 | i | 60S ribosomal protein L36 | polymer | 105 | 12263.8 | 1 | UniProt (G1TTQ5) Pfam (PF01158) In PDB | Oryctolagus cuniculus (Rabbit) | |
35 | j | Ribosomal protein L37 | polymer | 97 | 11111.0 | 1 | UniProt (U3KPD5) Pfam (PF01907) In PDB | Oryctolagus cuniculus (Rabbit) | |
36 | k | 60S ribosomal protein L38 | polymer | 70 | 8238.9 | 1 | UniProt (G1U001) Pfam (PF01781) In PDB | Oryctolagus cuniculus (Rabbit) | |
37 | l | eL39 | polymer | 51 | 6455.8 | 1 | UniProt (G1TTN1) Pfam (PF00832) In PDB | Oryctolagus cuniculus (Rabbit) | |
38 | m | eL40 | polymer | 102 | 11699.8 | 1 | Oryctolagus cuniculus | ||
39 | n | 60s ribosomal protein l41 | polymer | 25 | 3473.5 | 1 | UniProt (A0A087WNH4) Pfam (PF05162) In PDB | Oryctolagus cuniculus (Rabbit) | |
40 | o | eL42 | polymer | 106 | 12477.0 | 1 | UniProt (G1U344) Pfam (PF00935) UniProt (by SIFTS) (G1T040) In PDB | Oryctolagus cuniculus (Rabbit) | |
41 | p | eL43 | polymer | 92 | 10299.4 | 1 | UniProt (G1SY53) Pfam (PF01780) In PDB | Oryctolagus cuniculus (Rabbit) | |
42 | r | eL28 | polymer | 137 | 15783.6 | 1 | UniProt (G1U7L1) Pfam (PF01778) In PDB | Oryctolagus cuniculus (Rabbit) | |
43 | AA | 40S ribosomal protein SA | polymer | 295 | 32958.0 | 1 | UniProt (G1TLT8) Pfam (PF00318) Pfam (PF16122) In PDB | Oryctolagus cuniculus (Rabbit) | 37 kDa laminin receptor precursor,37LRP,37/67 kDa laminin receptor,LRP/LR,67 kDa laminin receptor,67LR,Laminin receptor 1,LamR,Laminin-binding protein precursor p40,LBP/p40 |
44 | BB | eS1 | polymer | 264 | 30002.1 | 1 | UniProt (G1SS70) Pfam (PF01015) In PDB | Oryctolagus cuniculus (Rabbit) | 40S ribosomal protein S3a |
45 | CC | uS5 | polymer | 293 | 31327.4 | 1 | Oryctolagus cuniculus | ||
46 | DD | Ribosomal protein S3 | polymer | 243 | 26715.3 | 1 | UniProt (G1TNM3) Pfam (PF07650) Pfam (PF00189) In PDB | Oryctolagus cuniculus (Rabbit) | |
47 | EE | 40S ribosomal protein S4 | polymer | 263 | 29654.9 | 1 | UniProt (G1TK17) Pfam (PF08071) Pfam (PF00900) Pfam (PF00467) Pfam (PF16121) In PDB | Oryctolagus cuniculus (Rabbit) | |
48 | FF | uS7 | polymer | 204 | 22913.5 | 1 | UniProt (G1TFM5) Pfam (PF00177) In PDB | Oryctolagus cuniculus (Rabbit) | 40S ribosomal protein S5 |
49 | GG | eS6 | polymer | 249 | 28751.9 | 1 | UniProt (G1TM55) Pfam (PF01092) In PDB | Oryctolagus cuniculus (Rabbit) | 40S ribosomal protein S6 |
50 | HH | eS7 | polymer | 194 | 22168.9 | 1 | UniProt (G1SVB0) In PDB | Oryctolagus cuniculus (Rabbit) | 40S ribosomal protein S7 |
51 | II | eS8 | polymer | 208 | 24263.4 | 1 | UniProt (G1TJW1) Pfam (PF01201) In PDB | Oryctolagus cuniculus (Rabbit) | 40S ribosomal protein S8 |
52 | JJ | uS4 | polymer | 194 | 22641.6 | 1 | UniProt (B7NZS8) Pfam (PF00163) Pfam (PF01479) In PDB | Oryctolagus cuniculus (Rabbit) | Ribosomal protein S9 |
53 | KK | S10_plectin domain-containing protein | polymer | 165 | 18933.8 | 1 | UniProt (G1TPV3) Pfam (PF03501) In PDB | Oryctolagus cuniculus (Rabbit) | |
54 | LL | uS17 | polymer | 158 | 18468.8 | 1 | UniProt (G1TRM4) Pfam (PF16205) Pfam (PF00366) In PDB | Oryctolagus cuniculus (Rabbit) | 40S ribosomal protein S11 |
55 | MM | eS12 | polymer | 132 | 14539.0 | 1 | UniProt (G1SFR8) Pfam (PF01248) In PDB | Oryctolagus cuniculus (Rabbit) | 40S ribosomal protein S12 |
56 | NN | uS15 | polymer | 151 | 17259.4 | 1 | UniProt (G1SP51) Pfam (PF08069) Pfam (PF00312) In PDB | Oryctolagus cuniculus (Rabbit) | Ribosomal protein S13 |
57 | OO | uS11 | polymer | 168 | 18134.0 | 1 | UniProt (G1U472) Pfam (PF00411) UniProt (by SIFTS) (G1T1F0) In PDB | Oryctolagus cuniculus (Rabbit) | |
58 | PP | uS19 | polymer | 145 | 17049.2 | 1 | UniProt (G1U0Q2) Pfam (PF00203) In PDB | Oryctolagus cuniculus (Rabbit) | |
59 | uS9 | polymer | 146 | 16477.4 | 1 | UniProt (G1SGX4) Pfam (PF00380) In PDB | Oryctolagus cuniculus (Rabbit) | ||
60 | RR | eS17 | polymer | 135 | 15552.1 | 1 | UniProt (G1TU13) Pfam (PF00833) In PDB | Oryctolagus cuniculus (Rabbit) | |
61 | SS | uS13 | polymer | 152 | 17759.8 | 1 | UniProt (G1TPG3) Pfam (PF00416) In PDB | Oryctolagus cuniculus (Rabbit) | |
62 | TT | eS19 | polymer | 145 | 16106.6 | 1 | UniProt (G1TN62) Pfam (PF01090) In PDB | Oryctolagus cuniculus (Rabbit) | |
63 | UU | uS10 | polymer | 119 | 13398.8 | 1 | UniProt (G1SIZ2) Pfam (PF00338) In PDB | Oryctolagus cuniculus (Rabbit) | |
64 | VV | 40S ribosomal protein S21 | polymer | 83 | 9124.4 | 1 | UniProt (G1TM82) Pfam (PF01249) In PDB | Oryctolagus cuniculus (Rabbit) | |
65 | WW | uS8 | polymer | 130 | 14865.6 | 1 | UniProt (G1TG89) Pfam (PF00410) In PDB | Oryctolagus cuniculus (Rabbit) | Ribosomal protein S15a |
66 | XX | uS12 | polymer | 143 | 15844.7 | 1 | UniProt (G1SZ47) Pfam (PF00164) In PDB | Oryctolagus cuniculus (Rabbit) | |
67 | YY | 40S ribosomal protein S24 | polymer | 130 | 15107.9 | 1 | UniProt (G1T3D8) Pfam (PF01282) In PDB | Oryctolagus cuniculus (Rabbit) | |
68 | ZZ | eS25 | polymer | 125 | 13776.2 | 1 | UniProt (G1TDB3) Pfam (PF03297) In PDB | Oryctolagus cuniculus (Rabbit) | |
69 | aa | 40S ribosomal protein S26 | polymer | 115 | 13047.5 | 1 | UniProt (G1TFE8) Pfam (PF01283) In PDB | Oryctolagus cuniculus (Rabbit) | |
70 | bb | eS27 | polymer | 84 | 9480.2 | 1 | UniProt (G1TZ76) Pfam (PF01667) In PDB | Oryctolagus cuniculus (Rabbit) | 40S ribosomal protein S27 |
71 | cc | eS28 | polymer | 69 | 7855.1 | 1 | UniProt (G1TIB4) Pfam (PF01200) In PDB | Oryctolagus cuniculus (Rabbit) | Ribosomal protein S28 |
72 | dd | eS29 | polymer | 56 | 6690.8 | 1 | UniProt (G1U7M4) Pfam (PF00253) In PDB | Oryctolagus cuniculus (Rabbit) | |
73 | ee | eS30 | polymer | 133 | 14498.9 | 1 | UniProt (G1T8A2) Pfam (PF00240) Pfam (PF04758) In PDB | Oryctolagus cuniculus (Rabbit) | 40S ribosomal protein S30 |
74 | ff | eS31 | polymer | 156 | 18004.0 | 1 | UniProt (G1SK22) Pfam (PF00240) Pfam (PF01599) In PDB | Oryctolagus cuniculus (Rabbit) | Ribosomal protein S27a |
75 | gg | RACK1 | polymer | 317 | 35115.7 | 1 | UniProt (G1SJB4) Pfam (PF00400) In PDB | Oryctolagus cuniculus (Rabbit) | |
76 | 5 | 28S rRNA | polymer | 3603 | 1167622.6 | 1 | Oryctolagus cuniculus | ||
77 | 7 | 5S rRNA | polymer | 120 | 38691.9 | 1 | GenBank (X06789.1) | Oryctolagus cuniculus | |
78 | 8 | 5.8S rRNA | polymer | 156 | 50143.6 | 1 | Oryctolagus cuniculus | ||
79 | 2 | P-site tRNA | polymer | 76 | 24485.5 | 1 | Oryctolagus cuniculus | ||
80 | 9 | 18S rRNA | polymer | 1869 | 602777.9 | 1 | Oryctolagus cuniculus | ||
81 | 6 | mRNA | polymer | 10 | 3139.9 | 1 | synthetic construct | ||
82 | 5, 7, 9, A, B... | MAGNESIUM ION | non-polymer | 24.3 | 277 | Chemie (MG) | |||
83 | g, j, m, o, p... | ZINC ION | non-polymer | 65.4 | 8 | Chemie (ZN) | |||
84 | 5 | N-[(1R,3S,4R,5S)-3-{(1R)-2-[(2R,4r,6S)-2,6-dihydroxypiperidin-4-yl]-1-hydroxyethyl}-4-hydroxy-1,5-dimethylcyclohexyl]benzamide | non-polymer | 400.5 | 1 | Chemie (Z2V) |
Sequence modifications
B: 2 - 403 (UniProt: G1TL06)
C: 1 - 425 (UniProt: G1SVW5)
F: 1 - 247 (UniProt: G1TUB1)
G: 1 - 319 (UniProt: G1STW0)
L: 1 - 211 (UniProt: G1TPV0)
Q: 1 - 188 (UniProt: G1TFE0)
R: 1 - 196 (UniProt: G1TJR3)
S: 1 - 175 (UniProt: G1TTY7)
U: 1 - 128 (UniProt: G1TSG1)
k: 1 - 70 (UniProt: G1U001)
AA: 1 - 295 (UniProt: G1TLT8)
EE: 1 - 263 (UniProt: G1TK17)
II: 1 - 208 (UniProt: G1TJW1)
TT: 1 - 145 (UniProt: G1TN62)
VV: 1 - 83 (UniProt: G1TM82)
aa: 1 - 115 (UniProt: G1TFE8)
7: 1 - 120 (GenBank: X06789.1)
PDB | External Database | Details |
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Met 1 | - | initiating methionine |
PDB | External Database | Details |
---|---|---|
Lys 378 | - | insertion |
Val 379 | - | insertion |
Lys 380 | - | insertion |
Lys 381 | - | insertion |
Pro 382 | - | insertion |
Arg 383 | - | insertion |
Ala 384 | - | insertion |
Val 385 | - | insertion |
Gly 386 | - | insertion |
Ile 387 | - | insertion |
Lys 388 | - | insertion |
Gln 389 | - | insertion |
PDB | External Database | Details |
---|---|---|
Arg 61 | Gly 61 | conflict |
Arg 93 | Gly 93 | conflict |
Met 131 | Val 131 | conflict |
Ile 153 | Val 153 | conflict |
PDB | External Database | Details |
---|---|---|
Gly 244 | Cys 244 | conflict |
PDB | External Database | Details |
---|---|---|
Ile 46 | - | insertion |
Ala 47 | - | insertion |
Pro 48 | - | insertion |
Arg 49 | - | insertion |
Pro 50 | - | insertion |
Ala 51 | - | insertion |
Ala 52 | - | insertion |
Gly 53 | - | insertion |
Pro 54 | - | insertion |
PDB | External Database | Details |
---|---|---|
Asp 4 | Asn 4 | conflict |
Arg 14 | Trp 14 | conflict |
Met 53 | Leu 53 | conflict |
Arg 58 | Trp 58 | conflict |
Arg 75 | Gln 75 | conflict |
Ala 80 | Pro 80 | conflict |
Val 86 | Ile 86 | conflict |
Arg 104 | His 104 | conflict |
Arg 110 | Cys 110 | conflict |
Val 137 | Gly 137 | conflict |
Gly 157 | Arg 157 | conflict |
Arg 181 | Trp 181 | conflict |
PDB | External Database | Details |
---|---|---|
Arg 38 | Cys 38 | conflict |
Arg 64 | Gln 64 | conflict |
Thr 94 | Lys 94 | conflict |
PDB | External Database | Details |
---|---|---|
Met 1 | Thr 1 | conflict |
Pro 18 | - | insertion |
Thr 19 | - | insertion |
Pro 20 | Ser 18 | conflict |
Cys 22 | Ser 20 | conflict |
Arg 23 | Pro 21 | conflict |
Thr 24 | Ala 22 | conflict |
Ser 49 | Leu 47 | conflict |
Gln 50 | Glu 48 | conflict |
Arg 95 | His 93 | conflict |
Thr 101 | Ile 99 | conflict |
Thr 102 | Met 100 | conflict |
Gly 104 | Ser 102 | conflict |
Ile 126 | Val 124 | conflict |
Ile 132 | Met 130 | conflict |
Ser 135 | Ala 133 | conflict |
Lys 136 | Arg 134 | conflict |
Arg 138 | Pro 136 | conflict |
Lys 149 | Arg 147 | conflict |
Lys 151 | Arg 149 | conflict |
Thr 168 | Tyr 166 | conflict |
Thr 169 | Ala 167 | conflict |
Phe 176 | - | insertion |
PDB | External Database | Details |
---|---|---|
Leu 18 | Val 18 | conflict |
Gly 32 | Arg 32 | conflict |
Ala 36 | Glu 36 | conflict |
Phe 39 | Ser 39 | conflict |
Gly 54 | Arg 54 | conflict |
Val 60 | Ala 60 | conflict |
Ser 62 | Thr 62 | conflict |
Leu 63 | Ile 63 | conflict |
Arg 97 | His 97 | conflict |
Thr 106 | Ser 106 | conflict |
Glu 126 | Asp 126 | conflict |
PDB | External Database | Details |
---|---|---|
Lys 24 | Asn 24 | conflict |
PDB | External Database | Details |
---|---|---|
Thr 114 | Ala 114 | conflict |
PDB | External Database | Details |
---|---|---|
Gly 25 | Ser 25 | conflict |
Arg 51 | Lys 51 | conflict |
Thr 78 | Ala 78 | conflict |
Val 156 | Met 156 | conflict |
PDB | External Database | Details |
---|---|---|
Arg 47 | Gly 47 | conflict |
PDB | External Database | Details |
---|---|---|
Gly 119 | Trp 119 | conflict |
PDB | External Database | Details |
---|---|---|
Asn 3 | Ser 3 | conflict |
Asp 4 | Asn 4 | conflict |
Gln 33 | Pro 33 | conflict |
Phe 50 | Ser 50 | conflict |
Ala 75 | Ser 75 | conflict |
Asp 76 | His 76 | conflict |
Lys 81 | Gln 81 | conflict |
PDB | External Database | Details |
---|---|---|
Arg 28 | Cys 28 | conflict |
Ala 56 | Val 56 | conflict |
Arg 109 | Pro 109 | conflict |
PDB | External Database | Details |
---|---|---|
U 2 | N 2 | conflict |
C 36 | N 36 | conflict |
U 102 | N 102 | conflict |
U 112 | N 112 | conflict |
U 114 | N 114 | conflict |
U 119 | C 119 | conflict |
U 120 | N 120 | conflict |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 81 |
Total formula weight | 3356184.0 | |
Non-Polymers* | Number of molecules | 286 |
Total formula weight | 7656.2 | |
All* | Total formula weight | 3363840.2 |