7MC9
X-RAY STRUCTURE OF PEDV PAPAIN-LIKE PROTEASE 2 bound to UB-PA
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C, E, G, I... (A, C, E, G, I...) | 3C-like proteinase | polymer | 237 | 25812.3 | 8 | UniProt (A0A0S3MQV7) Pfam (PF08715) UniProt (by SIFTS) (A0A059VJE6) | Porcine epidemic diarrhea virus | Exoribonuclease,Growth factor-like peptide,Helicase,M-PRO,NendoU,Non-structural protein 1,Non-structural protein 10,Non-structural protein 2,Non-structural protein 3,Non-structural protein 4,Non-structural protein 6,Non-structural protein 7,Non-structural protein 8,Non-structural protein 9,ORF1ab polyprotein,PL1-PRO/PL2-PRO,PLP1/PLP2,Papain-like proteinases 1/2,Peptide HD2,Putative 2'-O-methyl transferase,RNA-directed RNA polymerase,Replicase polyprotein 1ab,Uridylate-specific endoribonuclease,nsp12,nsp15,nsp16,nsp5,p12,p195,p23,p34,p5,p87,p9 |
| 2 | B, D, F, H, J... (B, D, F, H, J...) | Ubiquitin | polymer | 75 | 8519.8 | 8 | UniProt (P0CG47) Pfam (PF00240) | Homo sapiens (Human) | |
| 3 | AA, BA, DA, FA, HA... (G, I, K, M, O...) | ZINC ION | non-polymer | 65.4 | 14 | Chemie (ZN) | |||
| 4 | CA, EA, GA, JA, LA... (G, I, K, M, O...) | prop-2-en-1-amine | non-polymer | 57.1 | 8 | Chemie (AYE) | |||
| 5 | MA, NA, OA, PA, QA... (C, D, E, G, H...) | water | water | 18.0 | 9 | Chemie (HOH) |
Sequence modifications
A, C, E, G, I, K, M, O: 3375 - 3607 (UniProt: A0A0S3MQV7)
| PDB | External Database | Details |
|---|---|---|
| Gly 3371 | - | expression tag |
| Ser 3372 | - | expression tag |
| His 3373 | - | expression tag |
| Met 3374 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 16 |
| Total formula weight | 274656.7 | |
| Non-Polymers* | Number of molecules | 22 |
| Total formula weight | 1372.5 | |
| All* | Total formula weight | 276029.2 |
