7M8U
Crystal Structure of HLA-B*35:01 in complex with IPFAMQMAY, an 9-mer epitope from SARS-CoV-2 spike (S896-904)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A | HLA class I histocompatibility antigen B, alpha chain | polymer | 277 | 32027.3 | 1 | UniProt (Q546I9) Pfam (PF00129) Pfam (PF07654) In PDB | Homo sapiens (Human) | HLA-B*35:01:01:NEW,MHC class I antigen,MHC class I protein |
| 2 | B | Beta-2-microglobulin | polymer | 100 | 11879.4 | 1 | UniProt (P61769) Pfam (PF07654) In PDB | Homo sapiens (Human) | |
| 3 | C | Spike protein S2 peptide | polymer | 9 | 1071.3 | 1 | UniProt (P0DTC2) In PDB | Severe acute respiratory syndrome coronavirus 2 | |
| 4 | A | PHOSPHATE ION | non-polymer | 95.0 | 2 | Chemie (PO4) | |||
| 5 | A, C | SODIUM ION | non-polymer | 23.0 | 3 | Chemie (NA) | |||
| 6 | water | water | 18.0 | 411 | Chemie (HOH) |
Sequence modifications
B: 1 - 99 (UniProt: P61769)
| PDB | External Database | Details |
|---|---|---|
| Met 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 44978.0 | |
| Non-Polymers* | Number of molecules | 5 |
| Total formula weight | 258.9 | |
| All* | Total formula weight | 45236.9 |
