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7M08

Post-catalytic nicked complex of DNA Polymerase Lambda with bound 1-nt gapped SSB substrate and incoming dUMPNPP

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1ADNA polymerase lambdapolymer34638551.01UniProt (Q9UGP5)
Pfam (PF14716)
Pfam (PF10391)
Pfam (PF14792)
Pfam (PF14791)
In PDB
Homo sapiens (Human)Pol Lambda,DNA polymerase beta-2,Pol beta2,DNA polymerase kappa
2TDNA (5'-D(*CP*GP*GP*CP*AP*GP*TP*AP*CP*TP*G)-3')polymer113374.21synthetic construct
3PDNA (5'-D(*CP*AP*GP*TP*AP*CP*T)-3')polymer72097.41synthetic construct
4DDNA (5'-D(P*GP*CP*CP*G)-3')polymer41191.81synthetic construct
5ASODIUM IONnon-polymer23.03Chemie (NA)
6ACHLORIDE IONnon-polymer35.52Chemie (CL)
7AMAGNESIUM IONnon-polymer24.31Chemie (MG)
8A1,2-ETHANEDIOLnon-polymer62.11Chemie (EDO)
9AACETATE IONnon-polymer59.01Chemie (ACT)
10waterwater18.0336Chemie (HOH)
Sequence modifications
A: 234 - 575 (UniProt: Q9UGP5)
PDBExternal DatabaseDetails
Gly 230-expression tag
Ser 231-expression tag
Ala 232-expression tag
Ala 233-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight45214.4
Non-Polymers*Number of molecules8
Total formula weight285.3
All*Total formula weight45499.7
*Water molecules are not included.

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PDB entries from 2024-06-12

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