7LQY
Structure of squirrel TRPV1 in apo state
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (A, B, C, D) | Osm-9-like TRP channel 1 | polymer | 844 | 95902.8 | 4 | UniProt (I3LZN5) Pfam (PF12796) Pfam (PF00023) Pfam (PF00520) | Ictidomys tridecemlineatus (Thirteen-lined ground squirrel Spermophilus tridecemlineatus) | Transient receptor potential cation channel subfamily V member 1,Vanilloid receptor 1 |
| 2 | BA, CA, DA, E, EA... (C, A, D, B) | (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate | non-polymer | 760.1 | 32 | Chemie (POV) PubChem (168614) PubChem (6070971) PubChem (65167) PubChem (5497103) PubChem (6436017) PubChem (6506401) PubChem (10908846) | |||
| 3 | AA, G, MA, R (C, A, D, B) | 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoinositol | non-polymer | 837.1 | 4 | Chemie (YBG) PubChem (17754123) PubChem (46936310) PubChem (49867503) PubChem (71296232) PubChem (155923780) PubChem (172432020) PubChem (172432021) PubChem (23644270) PubChem (5282295) PubChem (101591744) PubChem (11679481) PubChem (134757539) PubChem (138234040) PubChem (5771758) PubChem (6443073) | |||
| 4 | N (A) | CHLORIDE ION | non-polymer | 35.5 | 1 | Chemie (CL) PubChem (312) | |||
| 5 | O (A) | SODIUM ION | non-polymer | 23.0 | 1 | Chemie (NA) PubChem (923) |
Sequence modifications
A, B, C, D: 1 - 840 (UniProt: I3LZN5)
| PDB | External Database | Details |
|---|---|---|
| Leu 841 | - | expression tag |
| Pro 842 | - | expression tag |
| Val 843 | - | expression tag |
| Arg 844 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 383611.1 | |
| Non-Polymers* | Number of molecules | 38 |
| Total formula weight | 27729.2 | |
| All* | Total formula weight | 411340.3 |
