7LFQ
Pyrococcus RNA ligase
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | RNA-splicing ligase RtcB | polymer | 501 | 55801.8 | 1 | UniProt (O59245) Pfam (PF01139) | Pyrococcus horikoshii | 3'-phosphate/5'-hydroxy nucleic acid ligase |
| 2 | B (B) | DNA (5'-D(*AP*TP*GP*TP*CP*C)-3') | polymer | 6 | 1784.2 | 1 | synthetic construct | ||
| 3 | C (A) | SULFATE ION | non-polymer | 96.1 | 1 | Chemie (SO4) | |||
| 4 | D (A) | POTASSIUM ION | non-polymer | 39.1 | 1 | Chemie (K) | |||
| 5 | E (A) | water | water | 18.0 | 17 | Chemie (HOH) |
Sequence modifications
A: 1 - 96 (UniProt: O59245)
A: 97 - 481 (UniProt: O59245)
| PDB | External Database | Details |
|---|---|---|
| Met -19 | - | initiating methionine |
| Gly -18 | - | expression tag |
| Ser -17 | - | expression tag |
| Ser -16 | - | expression tag |
| His -15 | - | expression tag |
| His -14 | - | expression tag |
| His -13 | - | expression tag |
| His -12 | - | expression tag |
| His -11 | - | expression tag |
| His -10 | - | expression tag |
| Ser -9 | - | expression tag |
| Ser -8 | - | expression tag |
| Gly -7 | - | expression tag |
| Leu -6 | - | expression tag |
| Val -5 | - | expression tag |
| Pro -4 | - | expression tag |
| Arg -3 | - | expression tag |
| Gly -2 | - | expression tag |
| Ser -1 | - | expression tag |
| His 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 57586.0 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 135.2 | |
| All* | Total formula weight | 57721.1 |






