7L7E
Crystal structure of SARS-CoV-2 spike RBD in complex with human monoclonal antibodies AZD8895 and AZD1061
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, G, H, O (A, H, I, T) | heavy chain of human monoclonal antibody AZD8895 | polymer | 225 | 23942.0 | 4 | Homo sapiens (Human) | ||
2 | B, I, J, P (B, J, L, U) | light chain of human monoclonal antibody Fab AZD8895 | polymer | 216 | 23574.1 | 4 | Homo sapiens (Human) | ||
3 | C, E, K, M (C, E, M, O) | heavy chain of human monoclonal antibody Fab AZD1061 | polymer | 236 | 25051.1 | 4 | Homo sapiens (Human) | ||
4 | D, F, L, N (D, F, N, P) | light chain of human monoclonal antibody Fab AZD1061 | polymer | 219 | 24147.8 | 4 | Homo sapiens (Human) | ||
5 | Q, R, S, T (G, K, S, b) | Spike protein S1 | polymer | 215 | 24229.2 | 4 | UniProt (P0DTC2) Pfam (PF09408) | Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) | S glycoprotein,E2,Peplomer protein,Spike glycoprotein |
6 | AA, BA, U, V, W... (T, U, A, B, H...) | PHOSPHATE ION | non-polymer | 95.0 | 8 | Chemie (PO4) | |||
7 | CA, DA, EA, FA (G, K, S, b) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 4 | Chemie (NAG) | |||
8 | GA, HA, IA, JA, KA... (A, B, C, D, E...) | water | water | 18.0 | 144 | Chemie (HOH) |
Sequence modifications
G, K, S, b: 330 - 529 (UniProt: P0DTC2)
PDB | External Database | Details |
---|---|---|
Gly 530 | - | expression tag |
Leu 531 | - | expression tag |
Val 532 | - | expression tag |
Pro 533 | - | expression tag |
Arg 534 | - | expression tag |
Gly 535 | - | expression tag |
Ser 536 | - | expression tag |
His 537 | - | expression tag |
His 538 | - | expression tag |
His 539 | - | expression tag |
His 540 | - | expression tag |
His 541 | - | expression tag |
His 542 | - | expression tag |
His 543 | - | expression tag |
His 544 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 20 |
Total formula weight | 483776.9 | |
Non-Polymers* | Number of molecules | 12 |
Total formula weight | 1644.6 | |
All* | Total formula weight | 485421.5 |