7KTM
DNA Polymerase Mu (K438D), 8-oxodGTP:Ct Reaction State Ternary Complex, 50 mM Mn2+ (30min)
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | DNA-directed DNA/RNA polymerase mu | polymer | 356 | 40040.3 | 1 | UniProt (Q9NP87) Pfam (PF14716) Pfam (PF10391) Pfam (PF14792) Pfam (PF14791) In PDB | Homo sapiens (Human) | Pol Mu,Terminal transferase |
2 | T | DNA (5'-D(*CP*GP*GP*CP*CP*TP*AP*CP*G)-3') | polymer | 9 | 2716.8 | 1 | synthetic construct | ||
3 | P | DNA (5'-D(*CP*GP*TP*AP*(8OG))-3') | polymer | 5 | 1536.0 | 1 | synthetic construct | ||
4 | D | DNA (5'-D(P*GP*CP*CP*G)-3') | polymer | 4 | 1191.8 | 1 | synthetic construct | ||
5 | A, T, P, D | MANGANESE (II) ION | non-polymer | 54.9 | 10 | Chemie (MN) | |||
6 | A | 8-OXO-2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE | non-polymer | 523.2 | 1 | Chemie (8DG) | |||
7 | A | PYROPHOSPHATE | non-polymer | 178.0 | 1 | Chemie (PPV) | |||
8 | A | 1,2-ETHANEDIOL | non-polymer | 62.1 | 4 | Chemie (EDO) | |||
9 | A | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID | non-polymer | 238.3 | 1 | Chemie (EPE) | |||
10 | water | water | 18.0 | 377 | Chemie (HOH) |
Sequence modifications
A: 132 - 494 (UniProt: Q9NP87)
PDB | External Database | Details |
---|---|---|
Gly 127 | - | expression tag |
Ser 128 | - | expression tag |
Ala 129 | - | expression tag |
Ala 130 | - | expression tag |
Ala 131 | - | expression tag |
- | Pro 398 | deletion |
- | Gly 399 | deletion |
- | Ala 400 | deletion |
- | Ala 401 | deletion |
- | Val 402 | deletion |
- | Gly 403 | deletion |
- | Gly 404 | deletion |
- | Ser 405 | deletion |
- | Thr 406 | deletion |
- | Arg 407 | deletion |
- | Pro 408 | deletion |
- | Cys 409 | deletion |
Gly 410 | Pro 410 | conflict |
Asp 438 | Lys 438 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 45485.0 | |
Non-Polymers* | Number of molecules | 17 |
Total formula weight | 1737.1 | |
All* | Total formula weight | 47222.1 |