7KHU
Crystal structure of the carbohydrate-binding domain VP8* of human P[4] rotavirus strain BM5265 in complex with LNDFH I
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Outer capsid protein VP4 | polymer | 160 | 18337.1 | 2 | UniProt (E9BVI9) Pfam (PF00426) | Human rotavirus A | |
| 2 | C, D (C, E) | alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-3)-[alpha-L-fucopyranose-(1-4)]2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose | branched | 999.9 | 2 | In PDB GlyTouCan (G09552LA) | |||
| 3 | E, F (A, B) | water | water | 18.0 | 45 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 160 (UniProt: E9BVI9)
| PDB | External Database | Details |
|---|---|---|
| Asn 70 | Ser 84 | conflict |
| Gly 84 | Ser 98 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 36674.3 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 1999.8 | |
| All* | Total formula weight | 38674.1 |
