7KC1
Cryo-EM structure of SRR2899884.46167H+MEDI8852L fab in complex with Victoria HA
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, C, G | Hemagglutinin | polymer | 345 | 38515.6 | 3 | UniProt (L0HR89) Pfam (PF00509) In PDB | Influenza A virus | |
2 | B, D, I | Fusion protein of Hemagglutinin and Envelope glycoprotein | polymer | 222 | 25259.1 | 3 | UniProt (A0A2P1E3C0) UniProt (M1E1E4) Pfam (PF00509) UniProt (by SIFTS) (L0HR89) In PDB | Influenza A virus | |
3 | H, E, J | Fab heavy chain | polymer | 227 | 24292.3 | 3 | Homo sapiens (Human) | ||
4 | L, F, K | Fab light chain | polymer | 206 | 22450.8 | 3 | Homo sapiens (Human) | ||
5 | M, N, O, Q, R... | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 910.8 | 9 | In PDB GlyTouCan (G22768VO) | |||
6 | P, T, X | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 3 | In PDB GlyTouCan (G15407YE) | |||
7 | A, B, C, D, G... | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 15 | Chemie (NAG) |
Sequence modifications
B, D, I: 1 - 176 (UniProt: A0A2P1E3C0)
B, D, I: 189 - 216 (UniProt: M1E1E4)
PDB | External Database | Details |
---|---|---|
Ser 177 | - | linker |
Gly 178 | - | linker |
Arg 179 | - | linker |
Leu 180 | - | linker |
Val 181 | - | linker |
Pro 182 | - | linker |
Arg 183 | - | linker |
Gly 184 | - | linker |
Ser 185 | - | linker |
Pro 186 | - | linker |
Gly 187 | - | linker |
Ser 188 | - | linker |
PDB | External Database | Details |
---|---|---|
His 217 | - | expression tag |
His 218 | - | expression tag |
His 219 | - | expression tag |
His 220 | - | expression tag |
His 221 | - | expression tag |
His 222 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 12 |
Total formula weight | 331553.4 | |
Branched | Number of molecules | 12 |
Total formula weight | 9957.0 | |
Non-Polymers* | Number of molecules | 15 |
Total formula weight | 3318.1 | |
All* | Total formula weight | 344828.6 |