7K9T
Co-crystal structure of alpha glucosidase with compound 5
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, C | Alpha glucosidase 2 alpha neutral subunit | polymer | 977 | 110654.1 | 2 | UniProt (A1A4T2) Pfam (PF13802) Pfam (PF01055) Pfam (PF21365) In PDB | Mus musculus (Mouse) | Neutral alpha-glucosidase AB |
2 | B, D | Glucosidase 2 subunit beta | polymer | 547 | 61451.5 | 2 | UniProt (O08795) Pfam (PF12999) Pfam (PF13202) Pfam (PF07915) In PDB | Mus musculus (Mouse) | 80K-H protein,Glucosidase II subunit beta,Protein kinase C substrate 60.1 kDa protein heavy chain,PKCSH |
3 | A, C | (1S,2S,3R,4S,5S)-1-(hydroxymethyl)-5-{[(5Z)-6-{[2-nitro-4-(2H-1,2,3-triazol-2-yl)phenyl]amino}hex-5-en-1-yl]amino}cyclohexane-1,2,3,4-tetrol | non-polymer | 480.5 | 2 | Chemie (W9V) | |||
4 | A, C, B | TRIETHYLENE GLYCOL | non-polymer | 150.2 | 9 | Chemie (PGE) | |||
5 | C, A | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 12 | Chemie (PEG) | |||
6 | A, C, D | 1,2-ETHANEDIOL | non-polymer | 62.1 | 25 | Chemie (EDO) | |||
7 | A, C | SULFATE ION | non-polymer | 96.1 | 6 | Chemie (SO4) | |||
8 | B, D | CALCIUM ION | non-polymer | 40.1 | 4 | Chemie (CA) | |||
9 | B, D | TETRAETHYLENE GLYCOL | non-polymer | 194.2 | 2 | Chemie (PG4) | |||
10 | C | HEXAETHYLENE GLYCOL | non-polymer | 282.3 | 1 | Chemie (P6G) | |||
11 | water | water | 18.0 | 981 | Chemie (HOH) |
Sequence modifications
A, C: 33 - 966 (UniProt: A1A4T2)
B, D: 15 - 517 (UniProt: O08795)
PDB | External Database | Details |
---|---|---|
Met 2 | - | initiating methionine |
Gly 3 | - | expression tag |
Ile 4 | - | expression tag |
Leu 5 | - | expression tag |
Pro 6 | - | expression tag |
Ser 7 | - | expression tag |
Pro 8 | - | expression tag |
Gly 9 | - | expression tag |
Met 10 | - | expression tag |
Pro 11 | - | expression tag |
Ala 12 | - | expression tag |
Leu 13 | - | expression tag |
Leu 14 | - | expression tag |
Ser 15 | - | expression tag |
Leu 16 | - | expression tag |
Val 17 | - | expression tag |
Ser 18 | - | expression tag |
Leu 19 | - | expression tag |
Leu 20 | - | expression tag |
Ser 21 | - | expression tag |
Val 22 | - | expression tag |
Leu 23 | - | expression tag |
Leu 24 | - | expression tag |
Met 25 | - | expression tag |
Gly 26 | - | expression tag |
Cys 27 | - | expression tag |
Val 28 | - | expression tag |
Ala 29 | - | expression tag |
Glu 30 | - | expression tag |
Thr 31 | - | expression tag |
Gly 32 | - | expression tag |
Asp 97 | Asn 97 | engineered mutation |
Ser 967 | - | expression tag |
Ala 968 | - | expression tag |
Trp 969 | - | expression tag |
Ser 970 | - | expression tag |
His 971 | - | expression tag |
Pro 972 | - | expression tag |
Gln 973 | - | expression tag |
Phe 974 | - | expression tag |
Glu 975 | - | expression tag |
Lys 976 | - | expression tag |
Leu 977 | - | expression tag |
Glu 978 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Met -16 | - | initiating methionine |
Gly -15 | - | expression tag |
Ile -14 | - | expression tag |
Leu -13 | - | expression tag |
Pro -12 | - | expression tag |
Ser -11 | - | expression tag |
Pro -10 | - | expression tag |
Gly -9 | - | expression tag |
Met -8 | - | expression tag |
Pro -7 | - | expression tag |
Ala -6 | - | expression tag |
Leu -5 | - | expression tag |
Leu -4 | - | expression tag |
Ser -3 | - | expression tag |
Leu -2 | - | expression tag |
Val -1 | - | expression tag |
Ser 0 | - | expression tag |
Leu 1 | - | expression tag |
Leu 2 | - | expression tag |
Ser 3 | - | expression tag |
Val 4 | - | expression tag |
Leu 5 | - | expression tag |
Leu 6 | - | expression tag |
Met 7 | - | expression tag |
Gly 8 | - | expression tag |
Cys 9 | - | expression tag |
Val 10 | - | expression tag |
Ala 11 | - | expression tag |
Glu 12 | - | expression tag |
Thr 13 | - | expression tag |
Gly 14 | - | expression tag |
Ser 518 | - | expression tag |
Ala 519 | - | expression tag |
Trp 520 | - | expression tag |
Leu 521 | - | expression tag |
Glu 522 | - | expression tag |
Thr 523 | - | expression tag |
Lys 524 | - | expression tag |
His 525 | - | expression tag |
His 526 | - | expression tag |
His 527 | - | expression tag |
His 528 | - | expression tag |
His 529 | - | expression tag |
His 530 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 344211.1 | |
Non-Polymers* | Number of molecules | 61 |
Total formula weight | 6545.2 | |
All* | Total formula weight | 350756.3 |