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7K31

Crystal structure of Endonuclease Q complex with 27-mer duplex substrate with dI at the active site

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Endonuclease Qpolymer39544456.31UniProt (I6V2I0)
UniProt (by SIFTS) (Q8U0N5)
Pyrococcus furiosus
2B
(B)
DNA (27-MER)polymer278266.31synthetic construct
3C
(C)
DNA (27-MER)polymer278330.41synthetic construct
4D
(A)
1,2-ETHANEDIOLnon-polymer62.11Chemie (EDO)
5E, F, G
(A)
ZINC IONnon-polymer65.43Chemie (ZN)
6H
(A)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
7I, J
(A)
CHLORIDE IONnon-polymer35.52Chemie (CL)
8K
(A)
waterwater18.08Chemie (HOH)
Sequence modifications
A: 1 - 395 (UniProt: I6V2I0)
PDBExternal DatabaseDetails
Asn 193Asp 193engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight61053.0
Non-Polymers*Number of molecules7
Total formula weight353.5
All*Total formula weight61406.5
*Water molecules are not included.

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PDB entries from 2025-07-09

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