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7JW8

Crystal structure of SARS-CoV-2 3CL protease in complex with compound 4 in space group P1

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(A, B, C, D)
3C-like proteinasepolymer30633825.54UniProt (P0DTD1)
Pfam (PF05409)
Severe acute respiratory syndrome coronavirus 2 (2019-nCoV SARS-CoV-2 COVID-19 virus)SARS-CoV-2 3CL protease
2E, G, H, I
(A, B, C, D)
ethyl (4R)-4-[[(2S)-4-methyl-2-[[(2S,3R)-3-[(2-methylpropan-2-yl)oxy]-2-(phenylmethoxycarbonylamino)butanoyl]amino]pentanoyl]amino]-5-[(3S)-2-oxidanylidenepyrrolidin-3-yl]pentanoatenon-polymer632.84Chemie (TG3)
3F, J
(A, D)
2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOLnon-polymer209.22Chemie (BTB)
4K, L, M, N
(A, B, C, D)
waterwater18.01020Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight135302.2
Non-Polymers*Number of molecules6
Total formula weight2949.6
All*Total formula weight138251.8
*Water molecules are not included.

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PDB entries from 2025-06-11

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