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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

7JT2

70S ribosome stalled on long mRNA with ArfB bound in the A site

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1b50S ribosomal protein L2polymer27129663.21UniProt (P60422)
Pfam (PF00181)
Pfam (PF03947)
In PDB		Escherichia coli (strain K12)Large ribosomal subunit protein uL2
2c50S ribosomal protein L3polymer20922277.51UniProt (P60438)
Pfam (PF00297)
In PDB		Escherichia coli (strain K12)Large ribosomal subunit protein uL3
3d50S ribosomal protein L4polymer20122121.61UniProt (P60723)
Pfam (PF00573)
In PDB		Escherichia coli (strain K12)Large ribosomal subunit protein uL4
4e50S ribosomal protein L5polymer17720073.21UniProt (P62399)
Pfam (PF00281)
Pfam (PF00673)
In PDB		Escherichia coli (strain K12)Large ribosomal subunit protein uL5
5f50S ribosomal protein L6polymer17618801.61UniProt (P0AG55)
Pfam (PF00347)
In PDB		Escherichia coli (strain K12)Large ribosomal subunit protein uL6
6g50S ribosomal protein L9polymer14915789.01UniProt (P0A7R1)
Pfam (PF01281)
Pfam (PF03948)
In PDB		Escherichia coli (strain K12)Large ribosomal subunit protein bL9
7h50S ribosomal protein L10polymer16517736.61UniProt (P0A7J3)
Pfam (PF00466)
In PDB		Escherichia coli (strain K12)50S ribosomal protein L8,Large ribosomal subunit protein uL10
8j50S ribosomal protein L13polymer14216050.61UniProt (P0AA10)
Pfam (PF00572)
In PDB		Escherichia coli (strain K12)Large ribosomal subunit protein uL13
9k50S ribosomal protein L14polymer12213451.91UniProt (P0ADY3)
Pfam (PF00238)
In PDB		Escherichia coli (strain K12)Large ribosomal subunit protein uL14
10l50S ribosomal protein L15polymer14314877.31UniProt (P02413)
Pfam (PF00828)
In PDB		Escherichia coli (strain K12)Large ribosomal subunit protein uL15
11m50S ribosomal protein L16polymer13615312.31UniProt (P0ADY7)
Pfam (PF00252)
In PDB		Escherichia coli (strain K12)Large ribosomal subunit protein uL16
12n50S ribosomal protein L17polymer12013721.91UniProt (P0AG44)
Pfam (PF01196)
In PDB		Escherichia coli (strain K12)Large ribosomal subunit protein bL17
13o50S ribosomal protein L18polymer11612663.51UniProt (P0C018)
Pfam (PF00861)
In PDB		Escherichia coli (strain K12)Large ribosomal subunit protein uL18
14p50S ribosomal protein L19polymer11413028.11UniProt (P0A7K6)
Pfam (PF01245)
In PDB		Escherichia coli (strain K12)Large ribosomal subunit protein bL19
15q50S ribosomal protein L20polymer11713396.81UniProt (P0A7L3)
Pfam (PF00453)
In PDB		Escherichia coli (strain K12)Large ribosomal subunit protein bL20
16r50S ribosomal protein L21polymer10311586.41UniProt (P0AG48)
Pfam (PF00829)
In PDB		Escherichia coli (strain K12)Large ribosomal subunit protein bL21
17s50S ribosomal protein L22polymer11012253.41UniProt (P61175)
Pfam (PF00237)
In PDB		Escherichia coli (strain K12)Large ribosomal subunit protein uL22
18t50S ribosomal protein L23polymer9310546.51UniProt (P0ADZ0)
Pfam (PF00276)
In PDB		Escherichia coli (strain K12)Large ribosomal subunit protein uL23
19u50S ribosomal protein L24polymer10211078.91UniProt (P60624)
Pfam (PF00467)
Pfam (PF17136)
In PDB		Escherichia coli (strain K12)Large ribosomal subunit protein uL24
20v50S ribosomal protein L25polymer9410713.51UniProt (P68919)
Pfam (PF01386)
In PDB		Escherichia coli (strain K12)Large ribosomal subunit protein bL25
21w50S ribosomal protein L27polymer758174.41UniProt (P0A7L8)
Pfam (PF01016)
In PDB		Escherichia coli (strain K12)Large ribosomal subunit protein bL27
22x50S ribosomal protein L28polymer778896.41UniProt (P0A7M2)
Pfam (PF00830)
In PDB		Escherichia coli (strain K12)Large ribosomal subunit protein bL28
23y50S ribosomal protein L29polymer637286.51UniProt (P0A7M6)
Pfam (PF00831)
In PDB		Escherichia coli (strain K12)Large ribosomal subunit protein uL29
24z50S ribosomal protein L30polymer586423.61UniProt (P0AG51)
Pfam (PF00327)
In PDB		Escherichia coli (strain K12)Large ribosomal subunit protein uL30
25B50S ribosomal protein L32polymer566332.21UniProt (P0A7N4)
Pfam (PF01783)
In PDB		Escherichia coli (strain K12)Large ribosomal subunit protein bL32
26C50S ribosomal protein L33polymer505814.81UniProt (P0A7N9)
Pfam (PF00471)
In PDB		Escherichia coli (strain K12)Large ribosomal subunit protein bL33
27D50S ribosomal protein L34polymer465397.51UniProt (P0A7P5)
Pfam (PF00468)
In PDB		Escherichia coli (strain K12)Large ribosomal subunit protein bL34
28E50S ribosomal protein L35polymer647181.81UniProt (P0A7Q1)
Pfam (PF01632)
In PDB		Escherichia coli (strain K12)Large ribosomal subunit protein bL35,Ribosomal protein A
29F50S ribosomal protein L36polymer384377.41UniProt (P0A7Q6)
Pfam (PF00444)
In PDB		Escherichia coli (strain K12)Large ribosomal subunit protein bL36-A,Ribosomal protein B
30G30S ribosomal protein S2polymer22525015.81UniProt (P0A7V0)
Pfam (PF00318)
In PDB		Escherichia coli (strain K12)Small ribosomal subunit protein uS2
31H30S ribosomal protein S3polymer20623078.81UniProt (P0A7V3)
Pfam (PF07650)
Pfam (PF00189)
In PDB		Escherichia coli (strain K12)Small ribosomal subunit protein uS3
32I30S ribosomal protein S4polymer20523383.01UniProt (P0A7V8)
Pfam (PF00163)
Pfam (PF01479)
In PDB		Escherichia coli (strain K12)Small ribosomal subunit protein uS4
33J30S ribosomal protein S5polymer15716532.11UniProt (P0A7W1)
Pfam (PF00333)
Pfam (PF03719)
In PDB		Escherichia coli (strain K12)Small ribosomal subunit protein uS5
34K30S ribosomal protein S6polymer10011669.41UniProt (P02358)
Pfam (PF01250)
In PDB		Escherichia coli (strain K12)Small ribosomal subunit protein bS6
35L30S ribosomal protein S7polymer15116861.51UniProt (P02359)
Pfam (PF00177)
In PDB		Escherichia coli (strain K12)Small ribosomal subunit protein uS7
36M30S ribosomal protein S8polymer12914015.41UniProt (P0A7W7)
Pfam (PF00410)
In PDB		Escherichia coli (strain K12)Small ribosomal subunit protein uS8
37N30S ribosomal protein S9polymer12714554.91UniProt (P0A7X3)
Pfam (PF00380)
In PDB		Escherichia coli (strain K12)Small ribosomal subunit protein uS9
38O30S ribosomal protein S10polymer9811197.01UniProt (P0A7R5)
Pfam (PF00338)
In PDB		Escherichia coli (strain K12)Small ribosomal subunit protein uS10
39P30S ribosomal protein S11polymer11612388.11UniProt (P0A7R9)
Pfam (PF00411)
In PDB		Escherichia coli (strain K12)Small ribosomal subunit protein uS11
40Q30S ribosomal protein S12polymer12313637.01UniProt (P0A7S3)
Pfam (PF00164)
In PDB		Escherichia coli (strain K12)Small ribosomal subunit protein uS12
41R30S ribosomal protein S13polymer11412625.81UniProt (P0A7S9)
Pfam (PF00416)
In PDB		Escherichia coli (strain K12)Small ribosomal subunit protein uS13
42S30S ribosomal protein S14polymer10011475.41UniProt (P0AG59)
Pfam (PF00253)
In PDB		Escherichia coli (strain K12)Small ribosomal subunit protein uS14
43T30S ribosomal protein S15polymer8810159.61UniProt (P0ADZ4)
Pfam (PF00312)
In PDB		Escherichia coli (strain K12)Small ribosomal subunit protein uS15
44U30S ribosomal protein S16polymer829207.61UniProt (P0A7T3)
Pfam (PF00886)
In PDB		Escherichia coli (strain K12)Small ribosomal subunit protein bS16
45V30S ribosomal protein S17polymer809263.91UniProt (P0AG63)
Pfam (PF00366)
In PDB		Escherichia coli (strain K12)Small ribosomal subunit protein uS17
46W30S ribosomal protein S18polymer657606.81UniProt (P0A7T7)
Pfam (PF01084)
In PDB		Escherichia coli (strain K12)Small ribosomal subunit protein bS18
47X30S ribosomal protein S19polymer799057.61UniProt (P0A7U3)
Pfam (PF00203)
In PDB		Escherichia coli (strain K12)Small ribosomal subunit protein uS19
48Y30S ribosomal protein S20polymer859506.21UniProt (P0A7U7)
Pfam (PF01649)
In PDB		Escherichia coli (strain K12)Small ribosomal subunit protein bS20
49Z30S ribosomal protein S21polymer657763.11UniProt (P68679)
Pfam (PF01165)
In PDB		Escherichia coli (strain K12)Small ribosomal subunit protein bS21
50316S ribosomal RNApolymer1539498724.41GenBank (1789840096)Escherichia coli (strain K12)
51123S ribosomal RNApolymer2903941305.31GenBank (802133627)Escherichia coli (strain K12)
5225S ribosomal RNApolymer12038813.11GenBank (1266961702)Escherichia coli (strain K12)
535tRNAfMetpolymer7724802.81GenBank (1275521620)Escherichia coli (strain K12)
544mRNApolymer237537.71Escherichia coli (strain K12)
558Peptidyl-tRNA hydrolase ArfBpolymer13214709.01UniProt (P40711)
Pfam (PF00472)
In PDB		Escherichia coli (strain K12)PTH,Alternative ribosome-rescue factor B
Sequence modifications
3: 2 - 1540 (GenBank: 1789840096)
PDBExternal DatabaseDetails
C 1490U 1585544conflict
1: 1 - 2903 (GenBank: 802133627)
PDBExternal DatabaseDetails
C 747U 2724742conflict
2: 1 - 119 (GenBank: 1266961702)
PDBExternal DatabaseDetails
A 120-insertion
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains55
Total formula weight2169919.3
All*Total formula weight2169919.3
*Water molecules are not included.

222926

PDB entries from 2024-07-24

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