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7JRZ

Self-assembly of a 3D DNA crystal lattice (4x6 duplex version) containing the J5 immobile Holliday junction with R3 symmetry

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(B)
DNA (5'-D(*GP*AP*GP*CP*AP*GP*AP*CP*CP*CP*GP*AP*CP*GP*GP*GP*AP*CP*TP*CP*A)-3')polymer216467.21synthetic construct
2B
(C)
DNA (5'-D(*TP*CP*TP*GP*AP*GP*TP*C)-3')polymer82417.61synthetic construct
3C
(D)
DNA (5'-D(P*GP*GP*TP*CP*TP*GP*C)-3')polymer72129.41synthetic construct
4D
(A)
DNA (5'-D(P*CP*CP*GP*TP*CP*G)-3')polymer61785.21synthetic construct
5E, G, H
(C, A)
CACODYLATE IONnon-polymer137.03Chemie (CAC)
6F
(A)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight12799.4
Non-Polymers*Number of molecules4
Total formula weight435.3
All*Total formula weight13234.7
*Water molecules are not included.

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PDB entries from 2024-11-06

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