7JNH
Crystal structure of a double-ENE RNA stability element in complex with a 28-mer poly(A) RNA
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | 28-mer poly(A) RNA | polymer | 28 | 9172.8 | 1 | synthetic construct | ||
| 2 | B (B) | Core double ENE RNA (Xtal construct) from Oryza sativa transposon,Core double ENE RNA (Xtal construct) from Oryza sativa transposon | polymer | 86 | 27541.1 | 1 | GenBank (AL442105.2) | Oryza sativa | |
| 3 | C, D, E, G, H... (A, B) | STRONTIUM ION | non-polymer | 87.6 | 6 | Chemie (SR) | |||
| 4 | F, J, K, L, M... (A, B) | COBALT HEXAMMINE(III) | non-polymer | 161.1 | 12 | Chemie (NCO) | |||
| 5 | U (B) | SPERMIDINE | non-polymer | 145.2 | 1 | Chemie (SPD) | |||
| 6 | V, W, X (B) | MAGNESIUM ION | non-polymer | 24.3 | 3 | Chemie (MG) | |||
| 7 | Y, Z (A, B) | water | water | 18.0 | 18 | Chemie (HOH) |
Sequence modifications
B: 5 - 40 (GenBank: AL442105.2)
B: 51 - 82 (GenBank: AL442105.2)
| PDB | External Database | Details |
|---|---|---|
| G 1 | - | insertion |
| G 2 | - | insertion |
| G 3 | - | insertion |
| C 4 | - | insertion |
| PDB | External Database | Details |
|---|---|---|
| G 41 | - | linker |
| G 42 | - | linker |
| C 43 | - | linker |
| G 44 | - | linker |
| A 45 | - | linker |
| A 46 | - | linker |
| A 47 | - | linker |
| G 48 | - | linker |
| U 49 | - | linker |
| C 50 | - | linker |
| G 83 | - | insertion |
| C 84 | - | insertion |
| C 85 | - | insertion |
| Ccc 86 | - | insertion |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 36713.9 | |
| Non-Polymers* | Number of molecules | 22 |
| Total formula weight | 2677.3 | |
| All* | Total formula weight | 39391.2 |
