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7JKH

Self-assembly of a 3D DNA crystal lattice (4x6 scramble duplex version) containing the J5 immobile Holliday junction with R3 symmetry

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
DNA (5'-D(P*CP*CP*GP*TP*CP*G)-3')polymer61785.21synthetic construct
2B
(B)
DNA (5'-D(*GP*AP*AP*CP*GP*AP*CP*AP*CP*CP*GP*AP*CP*GP*GP*GP*GP*AP*CP*TP*C)-3')polymer216467.21synthetic construct
3C
(C)
DNA (5'-D(*TP*CP*GP*AP*GP*TP*CP*C)-3')polymer82402.61synthetic construct
4D
(D)
DNA (5'-D(P*GP*TP*GP*TP*CP*GP*T)-3')polymer72144.41synthetic construct
5E, F
(A)
CACODYLATE IONnon-polymer137.02Chemie (CAC)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight12799.4
Non-Polymers*Number of molecules2
Total formula weight274.0
All*Total formula weight13073.4
*Water molecules are not included.

246031

PDB entries from 2025-12-10

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