7JJJ

Structure of SARS-CoV-2 3Q-2P full-length dimers of spike trimers

This is a non-PDB format compatible entry.

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A, B, C, D, E...	Spike glycoprotein	polymer	1273	141176.1	6	UniProt (P0DTC2) Pfam (PF16451) Pfam (PF09408) Pfam (PF19209) Pfam (PF01601) In PDB	Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)	S glycoprotein,E2,Peplomer protein
2	a, 0, QA, b, 1...	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	branched		424.4	76	In PDB GlyTouCan (G42666HT)
3	6, S	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose	branched		570.5	2	In PDB GlyTouCan (G21290RB)
4	XA, t	beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose	branched		732.7	2	In PDB GlyTouCan (G32152BH)
5	A, B, C, D, E...	2-acetamido-2-deoxy-beta-D-glucopyranose	non-polymer		221.2	16	Chemie (NAG)

Sequence modifications

A, B, C, D, E, F: 1 - 1273 (UniProt: P0DTC2)

PDB	External Database	Details
Gln 682	Arg 682	engineered mutation
Gln 683	Arg 683	engineered mutation
Gln 685	Arg 685	engineered mutation
Pro 986	Lys 986	engineered mutation
Pro 987	Val 987	engineered mutation

Contents of the asymmetric unit

Polymers	Number of chains	6
	Total formula weight	847056.8
Branched	Number of molecules	80
	Total formula weight	34860.9
Non-Polymers*	Number of molecules	16
	Total formula weight	3539.3
All*	Total formula weight	885457.0

*Water molecules are not included.