7JID
Crystal structure of the L780 UDP-rhamnose synthase from Acanthamoeba polyphaga mimivirus
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | UDP-L-Rhamnose Synthase | polymer | 292 | 33193.9 | 2 | UniProt (Q5UPS5) Pfam (PF04321) | Acanthamoeba polyphaga mimivirus (APMV) | Uncharacterized protein L780 |
| 2 | C, K (A, B) | [[(2~{R},3~{S},4~{R},5~{R})-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{R},4~{R},5~{R},6~{S})-6-methyl-3,4,5-tris(oxidanyl)oxan-2-yl] hydrogen phosphate | non-polymer | 550.3 | 2 | Chemie (AWU) PubChem (16667351) PubChem (23724469) PubChem (49852436) PubChem (101362597) PubChem (101367459) PubChem (102235717) PubChem (102469591) PubChem (11966154) PubChem (12002963) PubChem (101016834) PubChem (192751) PubChem (439674) PubChem (4633275) PubChem (11146048) PubChem (11753639) PubChem (134727715) | |||
| 3 | D, L (A, B) | NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | non-polymer | 743.4 | 2 | Chemie (NAP) PubChem (4412) PubChem (46936685) PubChem (90473931) PubChem (91972139) PubChem (145946263) PubChem (153311489) PubChem (174001641) PubChem (71717786) PubChem (5885) PubChem (165382010) | |||
| 4 | E, F, G, H, I... (A, B) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 9 | Chemie (EDO) | |||
| 5 | P, Q (A, B) | water | water | 18.0 | 700 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 289 (UniProt: Q5UPS5)
| PDB | External Database | Details |
|---|---|---|
| Gly -2 | - | expression tag |
| Gly -1 | - | expression tag |
| His 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 66387.7 | |
| Non-Polymers* | Number of molecules | 13 |
| Total formula weight | 3146.0 | |
| All* | Total formula weight | 69533.7 |
