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7I2G

Group deposition for crystallographic fragment screening of the NS5 RNA-dependent RNA polymerase from Dengue virus serotype 2 -- Crystal structure of the NS5 RNA-dependent RNA polymerase from Dengue virus serotype 2 in complex with Z1079512010 (DNV2_NS5A-x0379)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
NS5 RNA-dependent RNA polymerasepolymer63773890.01UniProt (Q91H74)
Pfam (PF00972)
Pfam (PF20483)
dengue virus type 2
2B, C
(A)
ZINC IONnon-polymer65.42Chemie (ZN)
3D
(A)
2-(N-MORPHOLINO)-ETHANESULFONIC ACIDnon-polymer195.21Chemie (MES)
4E, F
(A)
DIMETHYL SULFOXIDEnon-polymer78.12Chemie (DMS)
5G, H
(A)
PHOSPHATE IONnon-polymer95.02Chemie (PO4)
6I
(A)
DI(HYDROXYETHYL)ETHERnon-polymer106.11Chemie (PEG)
7J, M
(A)
CHLORIDE IONnon-polymer35.52Chemie (CL)
8K, L
(A)
6-methyl-2-[(3-methyl-1,2-oxazol-5-yl)methyl]pyridazin-3(2H)-onenon-polymer205.22Chemie (UWS)
9N
(A)
waterwater18.0307Chemie (HOH)
Sequence modifications
A: 266 - 900 (UniProt: Q91H74)
PDBExternal DatabaseDetails
Gly 264-expression tag
Pro 265-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight73890.0
Non-Polymers*Number of molecules12
Total formula weight1259.7
All*Total formula weight75149.7
*Water molecules are not included.

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PDB entries from 2025-06-18

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