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7GRY

Crystal structure of SARS-CoV-2 main protease in complex with cpd-21

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
3C-like proteinase nsp5polymer30633825.52UniProt (P0DTD1)
Pfam (PF05409)
Severe acute respiratory syndrome coronavirus 2 (2019-nCoV SARS-CoV-2)3CL-PRO,3CLp,Main protease,Mpro,Non-structural protein 5,nsp5,SARS coronavirus main proteinase
2C, D, E, F, G...
(A, B)
DIMETHYL SULFOXIDEnon-polymer78.19Chemie (DMS)
3H, I
(A)
CHLORIDE IONnon-polymer35.52Chemie (CL)
4N
(B)
1-(3,5-dichlorophenyl)pyrrolidine-2,5-dionenon-polymer244.11Chemie (XZO)
5O
(B)
SODIUM IONnon-polymer23.01Chemie (NA)
6P, Q
(A, B)
waterwater18.0533Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight67651.1
Non-Polymers*Number of molecules13
Total formula weight1041.2
All*Total formula weight68692.3
*Water molecules are not included.

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PDB entries from 2025-06-18

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