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7GRM

Crystal structure of SARS-CoV-2 main protease in complex with cpd-9

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
3C-like proteinase nsp5polymer30633825.52UniProt (P0DTD1)
Pfam (PF05409)
Severe acute respiratory syndrome coronavirus 2 (2019-nCoV SARS-CoV-2)3CL-PRO,3CLp,Main protease,Mpro,Non-structural protein 5,nsp5,SARS coronavirus main proteinase
2C, D, F, G, H...
(A, B)
DIMETHYL SULFOXIDEnon-polymer78.112Chemie (DMS)
3E, L
(A, B)
SODIUM IONnon-polymer23.02Chemie (NA)
4K
(B)
~{N}-(5-oxidanylidene-7,8-dihydro-6~{H}-naphthalen-2-yl)ethanamidenon-polymer203.21Chemie (ZHA)
5M
(B)
CHLORIDE IONnon-polymer35.51Chemie (CL)
6S, T
(A, B)
waterwater18.0366Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight67651.1
Non-Polymers*Number of molecules16
Total formula weight1222.3
All*Total formula weight68873.4
*Water molecules are not included.

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PDB entries from 2025-06-11

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