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7GRE

Crystal structure of SARS-CoV-2 main protease in complex with cpd-1

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
3C-like proteinase nsp5polymer30633825.52UniProt (P0DTD1)
Pfam (PF05409)
Severe acute respiratory syndrome coronavirus 23CL-PRO,3CLp,Main protease,Mpro,Non-structural protein 5,nsp5,SARS coronavirus main proteinase
2C
(A)
4-[3-(trifluoromethyl)-1H-pyrazol-5-yl]pyridinenon-polymer213.21Chemie (XWH)
3D, E, F, G, I...
(A, B)
DIMETHYL SULFOXIDEnon-polymer78.110Chemie (DMS)
4H, N
(A, B)
SODIUM IONnon-polymer23.02Chemie (NA)
5O
(B)
CHLORIDE IONnon-polymer35.51Chemie (CL)
6Q, R
(A, B)
waterwater18.0544Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight67651.1
Non-Polymers*Number of molecules14
Total formula weight1075.9
All*Total formula weight68727.0
*Water molecules are not included.

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PDB entries from 2025-07-02

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