7FFL
Cryo-EM structure of VEEV VLP-LDLRAD3-D1 complex at the 2-fold axes
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, F, S | Capsid protein | polymer | 275 | 30980.8 | 3 | UniProt (P05674) Pfam (PF00944) In PDB | Venezuelan equine encephalitis virus (strain TC-83) (VEEV) | Coat protein,C |
| 2 | B, C, G | Spike glycoprotein E1 | polymer | 442 | 47952.1 | 3 | UniProt (P05674) Pfam (PF01589) In PDB | Venezuelan equine encephalitis virus (strain TC-83) (VEEV) | E1 envelope glycoprotein |
| 3 | D, E, H | Low-density lipoprotein receptor class A domain-containing protein 3 | polymer | 70 | 7614.7 | 3 | UniProt (Q86YD5) Pfam (PF00057) In PDB | Homo sapiens (Human) | LDLR class A domain-containing protein 3 |
| 4 | I, P, T | assembly protein E3 | polymer | 59 | 6488.6 | 3 | UniProt (P05674) Pfam (PF01563) In PDB | Venezuelan equine encephalitis virus (strain TC-83) (VEEV) | p130 |
| 5 | J, Q, R | Spike glycoprotein E2 | polymer | 423 | 47113.7 | 3 | UniProt (P05674) Pfam (PF00943) In PDB | Venezuelan equine encephalitis virus (strain TC-83) (VEEV) | p62,pE2 |
| 6 | D, E, H | CALCIUM ION | non-polymer | 40.1 | 3 | Chemie (CA) |
Sequence modifications
A, F, S: 1 - 275 (UniProt: P05674)
| PDB | External Database | Details |
|---|---|---|
| Asn 64 | Lys 64 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 15 |
| Total formula weight | 420449.9 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 120.2 | |
| All* | Total formula weight | 420570.1 |
