7FD2

Cryo-EM structure of an alphavirus, Getah virus

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A, D, G, J (A, E, I, M)	Envelope glycoprotein 1	polymer	438	47560.6	4	UniProt (A0A1Z2R994) Pfam (PF01589) UniProt (by SIFTS) (Q5Y388)	Getah virus
2	B, E, H, K (B, F, J, N)	Envelope glycoprotein 2	polymer	419	46147.5	4	UniProt (A0A1Z2R994) Pfam (PF00943) UniProt (by SIFTS) (Q5Y388)	Getah virus	p130
3	C, F, I, L (C, G, K, O)	capsid protein	polymer	268	30200.1	4	UniProt (A0A1Z2R994) Pfam (PF00944) UniProt (by SIFTS) (Q5Y388)	Getah virus
4	M, P, S, V (D, P, S, V)	alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	branched		748.7	4	In PDB GlyTouCan (G22573RC)
5	N, Q, T, W (H, Q, T, W)	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	branched		424.4	4	In PDB GlyTouCan (G42666HT)
6	O, R, U, X (L, R, U, X)	beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	branched		586.5	4	In PDB GlyTouCan (G15407YE)
7	CB, IA, SA, Y (M, E, I, A)	2-acetamido-2-deoxy-beta-D-glucopyranose	non-polymer		221.2	4	Chemie (NAG)
8	DB, JA, TA, Z (M, E, I, A)	1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE	non-polymer		787.1	4	Chemie (PCW)
9	AA, AB, EB, GA, KA... (A, J, M, B, E...)	STEARIC ACID	non-polymer		284.5	8	Chemie (STE)
10	BA, BB, FA, FB, HA... (A, J, B, M, N...)	PALMITIC ACID	non-polymer		256.4	12	Chemie (PLM)
11	CA, DA, EA, GB, HB... (B, N, F, I, J)	CHOLESTEROL	non-polymer		386.7	12	Chemie (CLR)

Contents of the asymmetric unit

Polymers	Number of chains	12
	Total formula weight	495633.0
Branched	Number of molecules	12
	Total formula weight	7038.5
Non-Polymers*	Number of molecules	40
	Total formula weight	14026.1
All*	Total formula weight	516697.6

*Water molecules are not included.