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7F9O

PSI-NDH supercomplex of Barley

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, OA
(A, e)
Photosystem I P700 chlorophyll a apoprotein A1polymer75083217.22UniProt (S4Z1K7)
Pfam (PF00223)
Hordeum vulgare subsp. spontaneumPSI-A,PsaA
2B, PA
(B, f)
Photosystem I P700 chlorophyll a apoprotein A2polymer73482693.92UniProt (S4Z289)
Pfam (PF00223)
Hordeum vulgare subsp. spontaneumPSI-B,PsaB
3C, QA
(C, g)
Photosystem I iron-sulfur centerpolymer818909.32UniProt (S4YZ47)
Pfam (PF12838)
Hordeum vulgare subsp. spontaneumPhotosystem I reaction center subunit PSI-C,9 kDa polypeptide,PSI-C,Photosystem I subunit VII,PsaC
4D, RA
(D, h)
Photosystem I reaction center subunit II, chloroplasticpolymer20521958.12UniProt (P36213)
Pfam (PF02531)
Hordeum vulgare subsp. spontaneumPhotosystem I 20 kDa subunit,PSI-D
5E, SA
(E, i)
Photosystem I reaction center subunit IV, chloroplasticpolymer14715476.52UniProt (P13194)
Pfam (PF02427)
Hordeum vulgare subsp. spontaneumPSI-E,Photosystem I 10.8 kDa polypeptide
6F, TA
(F, j)
Photosystem I reaction center subunit III, chloroplasticpolymer23524866.62UniProt (P13192)
Pfam (PF02507)
Hordeum vulgare subsp. spontaneumPSI-F,Light-harvesting complex I 17 kDa protein
7G, UA
(H, k)
Photosystem I reaction center subunit VI, chloroplasticpolymer14314900.12UniProt (P20143)
Pfam (PF03244)
Hordeum vulgare subsp. spontaneumPSI-H,Light-harvesting complex I 11 kDa protein
8H, VA
(I, l)
Photosystem I reaction center subunit VIIIpolymer364010.92UniProt (S4Z1D9)
Pfam (PF00796)
Hordeum vulgare subsp. spontaneumPSI-I
9I, WA
(J, m)
Photosystem I reaction center subunit IXpolymer424747.62UniProt (S4Z1E9)
Pfam (PF01701)
Hordeum vulgare subsp. spontaneumPSI-J
10J, XA
(K, n)
Photosystem I reaction center subunit psaK, chloroplasticpolymer13113742.92UniProt (P36886)
Pfam (PF01241)
Hordeum vulgare subsp. spontaneumPhotosystem I reaction center subunit PSI-K,Light-harvesting complex I 7 kDa protein,PSI-K,Photosystem I subunit X
11K, YA
(L, o)
Photosystem I reaction center subunit XI, chloroplasticpolymer20922229.72UniProt (P23993)
Pfam (PF02605)
Hordeum vulgare subsp. spontaneumPSI-L,PSI subunit V
12L, ZA
(1, p)
Chlorophyll a-b binding protein Lhca1polymer24726691.42UniProt (A0A287WC32)Hordeum vulgare subsp. spontaneum
13M
(2)
Chlorophyll a-b binding protein, chloroplasticpolymer25527320.01UniProt (Q43485)
Pfam (PF00504)
Hordeum vulgare subsp. spontaneum
14AB, N
(3, q)
Chlorophyll a-b binding protein, chloroplasticpolymer26929374.52UniProt (F2DAN8)
Pfam (PF00504)
Hordeum vulgare subsp. spontaneumChlorophyll a-b binding protein Lhca3
15O
(5)
Chlorophyll a-b binding protein Lhca5polymer25727618.71Hordeum vulgare subsp. spontaneum
16P
(G)
NAD(P)H-quinone oxidoreductase subunit 1, chloroplasticpolymer34638544.31UniProt (P92432)
Pfam (PF00146)
Hordeum vulgare subsp. spontaneumNAD(P)H-quinone oxidoreductase subunit A,NAD(P)H dehydrogenase subunit 1,NDH subunit 1,NADH-plastoquinone oxidoreductase subunit 1
17Q
(M)
NAD(P)H-quinone oxidoreductase subunit 2, chloroplasticpolymer48353452.31UniProt (S4Z268)
Pfam (PF19530)
Pfam (PF00361)
Hordeum vulgare subsp. spontaneumNAD(P)H-quinone oxidoreductase subunit B,NAD(P)H dehydrogenase,subunit 2,NADH-plastoquinone oxidoreductase subunit 2
18R
(N)
NAD(P)H-quinone oxidoreductase subunit 3, chloroplasticpolymer11713299.61UniProt (S4Z1L1)
Pfam (PF00507)
Hordeum vulgare subsp. spontaneumNAD(P)H-quinone oxidoreductase subunit C,NAD(P)H dehydrogenase subunit 3,NADH-plastoquinone oxidoreductase subunit 3
19S
(O)
NAD(P)H-quinone oxidoreductase chain 4, chloroplasticpolymer49956222.81UniProt (S4Z8N2)
Pfam (PF00361)
Hordeum vulgare subsp. spontaneumNAD(P)H-quinone oxidoreductase chain D,NAD(P)H dehydrogenase,chain 4,NADH-plastoquinone oxidoreductase chain 4
20T
(P)
NAD(P)H-quinone oxidoreductase subunit 4L, chloroplasticpolymer10011199.21UniProt (S4Z1I1)
Pfam (PF00420)
Hordeum vulgare subsp. spontaneumNAD(P)H-quinone oxidoreductase subunit E,,NAD(P)H dehydrogenase subunit 4L,NADH-plastoquinone oxidoreductase subunit 4L
21U
(Q)
NADH-plastoquinone oxidoreductase subunit 5polymer77787552.91UniProt (A0A7T7JN26)
Pfam (PF00662)
Pfam (PF00361)
Pfam (PF01010)
Hordeum vulgare subsp. spontaneumNAD(P)H-quinone oxidoreductase subunit F, chloroplastic
22V
(R)
NAD(P)H-quinone oxidoreductase subunit 6, chloroplasticpolymer17619587.11UniProt (A0A4Y5SEJ9)
Pfam (PF00499)
Hordeum vulgare subsp. spontaneumNAD(P)H-quinone oxidoreductase subunit G, chloroplastic
23W
(S)
NAD(P)H-quinone oxidoreductase subunit H, chloroplasticpolymer38344563.41UniProt (S4Z272)
Pfam (PF00346)
Hordeum vulgare subsp. spontaneumNAD(P)H dehydrogenase,subunit H,NADH-plastoquinone oxidoreductase 49 kDa subunit,NADH-plastoquinone oxidoreductase subunit H
24X
(T)
NAD(P)H-quinone oxidoreductase subunit I, chloroplasticpolymer16519271.11UniProt (A0A218LNN1)
Pfam (PF12838)
Hordeum vulgare subsp. spontaneumNAD(P)H dehydrogenase subunit I,NDH subunit I,NADH-plastoquinone oxidoreductase subunit I
25Y
(U)
NAD(P)H-quinone oxidoreductase subunit J, chloroplasticpolymer15918733.21UniProt (Q7GT16)
Pfam (PF00329)
Hordeum vulgare subsp. spontaneumNAD(P)H dehydrogenase subunit J,NADH-plastoquinone oxidoreductase subunit J
26Z
(V)
NAD(P)H-quinone oxidoreductase subunit K, chloroplasticpolymer24527568.81UniProt (S4Z232)
Pfam (PF01058)
Hordeum vulgare subsp. spontaneumNAD(P)H dehydrogenase subunit K,NADH-plastoquinone oxidoreductase subunit K
27AA
(W)
NAD(P)H-quinone oxidoreductase subunit L, chloroplasticpolymer19222240.31UniProt (F2CUR7)
Pfam (PF10716)
Hordeum vulgare subsp. spontaneum
28BA
(X)
NAD(P)H-quinone oxidoreductase subunit M, chloroplasticpolymer21324051.01UniProt (F2D138)
Pfam (PF10664)
Hordeum vulgare subsp. spontaneumNAD(P)H dehydrogenase subunit M,NADH-plastoquinone oxidoreductase subunit M
29CA
(Y)
NAD(P)H-quinone oxidoreductase subunit N, chloroplasticpolymer23325928.01UniProt (A0A287M953)Hordeum vulgare subsp. spontaneum
30DA
(Z)
Unidentified stromal proteinpolymer615209.41Hordeum vulgare subsp. spontaneum
31EA
(a)
Photosynthetic NDH subunit of subcomplex L1polymer15417835.81Hordeum vulgare subsp. spontaneum
32FA
(b)
Photosynthetic NDH subunit of subcomplex L2polymer21623946.51UniProt (F2CTW7)
Pfam (PF05757)
Hordeum vulgare subsp. spontaneum
33GA
(c)
Photosynthetic NDH subunit of subcomplex L2polymer22724734.01Hordeum vulgare subsp. spontaneum
34HA
(4)
Photosynthetic NDH subunit of subcomplex L4polymer13013954.41Hordeum vulgare subsp. spontaneum
35IA
(d)
Photosynthetic NDH subunit of subcomplex L5polymer24325818.41UniProt (F2CTD7)
Pfam (PF00160)
Hordeum vulgare subsp. spontaneum
36JA
(6)
Photosynthetic NDH subunit of subcomplex B1polymer46951675.91UniProt (F2D3G1)Hordeum vulgare subsp. spontaneum
37KA
(7)
Photosynthetic NDH subunit of subcomplex B2polymer36138080.01UniProt (F2D932)Hordeum vulgare subsp. spontaneum
38LA
(8)
Photosynthetic NDH subunit of subcomplex B3polymer11913313.31UniProt (F2DD79)
Pfam (PF00111)
Hordeum vulgare subsp. spontaneum
39MA
(9)
Photosynthetic NDH subunit of subcomplex B4polymer839756.81Hordeum vulgare subsp. spontaneum
40NA
(0)
Photosynthetic NDH subunit of subcomplex B5polymer15518146.11UniProt (F2DWH9)Hordeum vulgare subsp. spontaneum
41BB
(r)
Chlorophyll a-b binding protein Lhca4polymer19721976.81UniProt (Q9LKC7)
Pfam (PF00504)
Hordeum vulgare subsp. spontaneumChlorophyll a-b binding protein, chloroplastic
42CB
(s)
Chlorophyll a-b binding protein, chloroplasticpolymer21123904.21UniProt (F2D0D5)
Pfam (PF00504)
Hordeum vulgare subsp. spontaneum
43DB, ZI
(A, e)
CHLOROPHYLL A ISOMERnon-polymer893.52Chemie (CL0)
44AC, AE, AH, AI, AJ...
(A, B, 2, 3, e...)
CHLOROPHYLL Anon-polymer893.5273Chemie (CLA)
45OK, RC, SM, UE
(e, A, f, B)
PHYLLOQUINONEnon-polymer450.74Chemie (PQN)
46AN, CF, IH, LQ, MO...
(f, B, 2, s, p...)
1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLEnon-polymer723.011Chemie (LHG)
47AF, AG, AL, BD, DD...
(B, L, e, A, 1...)
BETA-CAROTENEnon-polymer536.951Chemie (BCR)
48AD, BN, CL, CN, EF...
(A, g, f, C, 8)
IRON/SULFUR CLUSTERnon-polymer351.67Chemie (SF4)
49BF, LN, PF, ZM
(B, m, J, f)
DIGALACTOSYL DIACYL GLYCEROL (DGDG)non-polymer949.34Chemie (DGD)
50DI, JH, KF, KH, LF...
(5, 2, F, m, r)
1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDEnon-polymer787.27Chemie (LMG)
51BG, CG, FI, FP, NH...
(1, 5, r, 3, q...)
(3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOLnon-polymer568.912Chemie (LUT)
52AP, DH, EH, GH, HH...
(q, 2, s, p, 1...)
CHLOROPHYLL Bnon-polymer907.523Chemie (CHL)
53GI, GP, TG, XP
(5, r, 2, s)
(3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOLnon-polymer600.94Chemie (XAT)
54WI, XI
(Q)
1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROLnon-polymer795.12Chemie (SQD)
Sequence modifications
1, p: -8 - 238 (UniProt: A0A287WC32)
PDBExternal DatabaseDetails
Phe 73Unk 120conflict
Glu 74Unk 121conflict
Arg 75Unk 122conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains55
Total formula weight1511142.6
Non-Polymers*Number of molecules400
Total formula weight326306.3
All*Total formula weight1837448.9
*Water molecules are not included.

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PDB entries from 2025-06-18

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