7F75
Cryo-EM structure of Spx-dependent transcription activation complex
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, I | DNA-directed RNA polymerase subunit alpha | polymer | 314 | 34842.4 | 3 | UniProt (P20429) Pfam (PF01193) Pfam (PF01000) Pfam (PF03118) In PDB | Bacillus subtilis | RNAP subunit alpha,RNA polymerase subunit alpha,Transcriptase subunit alpha |
2 | C | DNA-directed RNA polymerase subunit beta | polymer | 1193 | 133847.9 | 1 | UniProt (P37870) Pfam (PF04560) Pfam (PF04563) Pfam (PF04561) Pfam (PF04565) Pfam (PF10385) Pfam (PF00562) In PDB | Bacillus subtilis | RNAP subunit beta,RNA polymerase subunit beta,Transcriptase subunit beta |
3 | D | DNA-directed RNA polymerase subunit beta' | polymer | 1199 | 134445.0 | 1 | UniProt (P37871) Pfam (PF04997) Pfam (PF00623) Pfam (PF04983) Pfam (PF05000) Pfam (PF04998) In PDB | Bacillus subtilis | RNAP subunit beta',RNA polymerase subunit beta',Transcriptase subunit beta' |
4 | E | DNA-directed RNA polymerase subunit omega | polymer | 67 | 7766.9 | 1 | UniProt (O35011) Pfam (PF01192) In PDB | Bacillus subtilis | RNAP omega subunit,RNA polymerase omega 2 subunit,Transcriptase subunit omega |
5 | F | RNA polymerase sigma factor SigA | polymer | 371 | 43007.4 | 1 | UniProt (P06224) Pfam (PF03979) Pfam (PF00140) Pfam (PF04542) Pfam (PF04539) Pfam (PF04545) In PDB | Bacillus subtilis | Sigma-43,Sigma-A,RNA polymerase sigma subunit |
6 | H | DNA-directed RNA polymerase subunit epsilon | polymer | 69 | 8263.4 | 1 | UniProt (O31718) Pfam (PF07288) In PDB | Bacillus subtilis | RNA polymerase auxiliary subunit epsilon subunit,RNAP epsilon subunit,DNA-directed RNA polymerase subunit omega 1,RNA polymerase epsilon subunit,RNA polymerase omega 1 subunit,Transcriptase subunit epsilon,Transcriptase subunit omega 1 |
7 | G | transcriptional regulator Spx | polymer | 131 | 15547.9 | 1 | Pfam (PF03960) UniProt (by SIFTS) (O31602) In PDB | Bacillus subtilis | |
8 | J | trxA promoter DNA-Non template strand | polymer | 68 | 21202.6 | 1 | Bacillus subtilis | ||
9 | K | trxA promoter DNA-template strand | polymer | 68 | 20886.4 | 1 | Bacillus subtilis | ||
10 | L | DNA-directed RNA polymerase subunit delta | polymer | 173 | 20417.9 | 1 | UniProt (P12464) Pfam (PF05066) In PDB | Bacillus subtilis | RNAP delta factor |
11 | D | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
12 | D | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 12 |
Total formula weight | 509912.6 | |
Non-Polymers* | Number of molecules | 3 |
Total formula weight | 155.1 | |
All* | Total formula weight | 510067.7 |