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7F75

Cryo-EM structure of Spx-dependent transcription activation complex

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, IDNA-directed RNA polymerase subunit alphapolymer31434842.43UniProt (P20429)
Pfam (PF01193)
Pfam (PF01000)
Pfam (PF03118)
In PDB
Bacillus subtilisRNAP subunit alpha,RNA polymerase subunit alpha,Transcriptase subunit alpha
2CDNA-directed RNA polymerase subunit betapolymer1193133847.91UniProt (P37870)
Pfam (PF04560)
Pfam (PF04563)
Pfam (PF04561)
Pfam (PF04565)
Pfam (PF10385)
Pfam (PF00562)
In PDB
Bacillus subtilisRNAP subunit beta,RNA polymerase subunit beta,Transcriptase subunit beta
3DDNA-directed RNA polymerase subunit beta'polymer1199134445.01UniProt (P37871)
Pfam (PF04997)
Pfam (PF00623)
Pfam (PF04983)
Pfam (PF05000)
Pfam (PF04998)
In PDB
Bacillus subtilisRNAP subunit beta',RNA polymerase subunit beta',Transcriptase subunit beta'
4EDNA-directed RNA polymerase subunit omegapolymer677766.91UniProt (O35011)
Pfam (PF01192)
In PDB
Bacillus subtilisRNAP omega subunit,RNA polymerase omega 2 subunit,Transcriptase subunit omega
5FRNA polymerase sigma factor SigApolymer37143007.41UniProt (P06224)
Pfam (PF03979)
Pfam (PF00140)
Pfam (PF04542)
Pfam (PF04539)
Pfam (PF04545)
In PDB
Bacillus subtilisSigma-43,Sigma-A,RNA polymerase sigma subunit
6HDNA-directed RNA polymerase subunit epsilonpolymer698263.41UniProt (O31718)
Pfam (PF07288)
In PDB
Bacillus subtilisRNA polymerase auxiliary subunit epsilon subunit,RNAP epsilon subunit,DNA-directed RNA polymerase subunit omega 1,RNA polymerase epsilon subunit,RNA polymerase omega 1 subunit,Transcriptase subunit epsilon,Transcriptase subunit omega 1
7Gtranscriptional regulator Spxpolymer13115547.91Pfam (PF03960)
UniProt (by SIFTS) (O31602)
In PDB
Bacillus subtilis
8JtrxA promoter DNA-Non template strandpolymer6821202.61Bacillus subtilis
9KtrxA promoter DNA-template strandpolymer6820886.41Bacillus subtilis
10LDNA-directed RNA polymerase subunit deltapolymer17320417.91UniProt (P12464)
Pfam (PF05066)
In PDB
Bacillus subtilisRNAP delta factor
11DMAGNESIUM IONnon-polymer24.31Chemie (MG)
12DZINC IONnon-polymer65.42Chemie (ZN)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains12
Total formula weight509912.6
Non-Polymers*Number of molecules3
Total formula weight155.1
All*Total formula weight510067.7
*Water molecules are not included.

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PDB entries from 2024-07-31

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