7F4W
Complex structure of HLA2402 with recognizing SARS-CoV-2 epitope pep4
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, C | MHC class I antigen | polymer | 308 | 35437.1 | 2 | UniProt (D9UAY1) Pfam (PF00129) Pfam (PF07654) In PDB | Homo sapiens (Human) | |
2 | B, D | Beta-2-microglobulin | polymer | 102 | 12093.6 | 2 | UniProt (P61769) Pfam (PF07654) In PDB | Homo sapiens (Human) | |
3 | E, F | SARS-CoV-2 T-cell Epitope pep4 | polymer | 9 | 1266.4 | 2 | UniProt (by SIFTS) (P0DTC2) In PDB | Severe acute respiratory syndrome coronavirus 2 |
Sequence modifications
A, C: 1 - 276 (UniProt: D9UAY1)
B, D: 1 - 99 (UniProt: P61769)
PDB | External Database | Details |
---|---|---|
Met -4 | - | initiating methionine |
Asn -3 | - | expression tag |
Ser -2 | - | expression tag |
Val -1 | - | expression tag |
Asp 0 | - | expression tag |
Gly 277 | - | expression tag |
Ser 278 | - | expression tag |
Gly 279 | - | expression tag |
Leu 280 | - | expression tag |
Asn 281 | - | expression tag |
Asp 282 | - | expression tag |
Ile 283 | - | expression tag |
Phe 284 | - | expression tag |
Glu 285 | - | expression tag |
Ala 286 | - | expression tag |
Gln 287 | - | expression tag |
Lys 288 | - | expression tag |
Ile 289 | - | expression tag |
Glu 290 | - | expression tag |
Trp 291 | - | expression tag |
His 292 | - | expression tag |
Ala 293 | - | expression tag |
Ala 294 | - | expression tag |
Ala 295 | - | expression tag |
Leu 296 | - | expression tag |
Glu 297 | - | expression tag |
His 298 | - | expression tag |
His 299 | - | expression tag |
His 300 | - | expression tag |
His 301 | - | expression tag |
His 302 | - | expression tag |
His 303 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Val -2 | - | expression tag |
Asp -1 | - | expression tag |
Met 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 6 |
Total formula weight | 97594.1 | |
All* | Total formula weight | 97594.1 |