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7DYV

Human JMJD5 in complex with MN and 5-(benzylamino)pyridine-2,4-dicarboxylic acid.

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Bifunctional peptidase and arginyl-hydroxylase JMJD5polymer23527261.91UniProt (Q8N371)
Pfam (PF13621)
Homo sapiens (Human)JmjC domain-containing protein 5,Jumonji C domain-containing protein 5,L-arginine (3R)-hydroxylase KDM8
2B
(A)
MANGANESE (II) IONnon-polymer54.91Chemie (MN)
3C
(A)
5-(benzylamino)pyridine-2,4-dicarboxylic acidnon-polymer272.31Chemie (HRF)
4D
(A)
waterwater18.0129Chemie (HOH)
Sequence modifications
A: 183 - 416 (UniProt: Q8N371)
PDBExternal DatabaseDetails
Ser 182-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight27261.9
Non-Polymers*Number of molecules2
Total formula weight327.2
All*Total formula weight27589.1
*Water molecules are not included.

246031

PDB entries from 2025-12-10

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