7DXA
PSII intermediate Psb28-RC47
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Photosystem II reaction center Psb28 protein | polymer | 116 | 13188.8 | 1 | UniProt (Q8DLJ8) Pfam (PF03912) | Thermosynechococcus vulcanus | Photosystem II 13 kDa protein,Photosystem II reaction center W protein |
| 2 | B (B) | Tsl0063 protein | polymer | 56 | 5943.9 | 1 | UniProt (Q8DMP8) Pfam (PF26394) | Thermosynechococcus vulcanus | |
| 3 | C (a) | Photosystem II protein D1 | polymer | 360 | 39792.4 | 1 | UniProt (P51765) | Thermosynechococcus vulcanus | PSII D1 protein,Photosystem II Q(B) protein |
| 4 | D (b) | Photosystem II CP47 reaction center protein | polymer | 505 | 56068.7 | 1 | UniProt (D0VWR1) | Thermosynechococcus vulcanus | PSII 47 kDa protein,Protein CP-47 |
| 5 | E (d) | Photosystem II D2 protein | polymer | 342 | 38404.9 | 1 | UniProt (D0VWR8) | Thermosynechococcus vulcanus | PSII D2 protein,Photosystem Q(A) protein |
| 6 | F (e) | Cytochrome b559 subunit alpha | polymer | 84 | 9580.8 | 1 | UniProt (P12238) | Thermosynechococcus vulcanus | PSII reaction center subunit V |
| 7 | G (f) | Cytochrome b559 subunit beta | polymer | 45 | 5067.9 | 1 | UniProt (P12239) | Thermosynechococcus vulcanus | PSII reaction center subunit VI |
| 8 | H (h) | Photosystem II reaction center protein H | polymer | 65 | 7227.6 | 1 | UniProt (P19052) | Thermosynechococcus vulcanus | PSII-H |
| 9 | I (i) | Photosystem II reaction center protein I | polymer | 38 | 4410.2 | 1 | UniProt (P12240) | Thermosynechococcus vulcanus | PSII-I,PSII 4.4 kDa protein |
| 10 | J (l) | Photosystem II reaction center protein L | polymer | 37 | 4299.0 | 1 | UniProt (P12241) | Thermosynechococcus vulcanus | PSII-L |
| 11 | K (m) | Photosystem II reaction center protein M | polymer | 36 | 4015.7 | 1 | UniProt (P12312) | Thermosynechococcus vulcanus | PSII-M |
| 12 | L (t) | Photosystem II reaction center protein T | polymer | 32 | 3878.7 | 1 | UniProt (P12313) | Thermosynechococcus vulcanus | PSII-Tc |
| 13 | M (x) | Photosystem II reaction center protein X | polymer | 40 | 4191.0 | 1 | UniProt (D0VWR4) | Thermosynechococcus vulcanus | |
| 14 | N (C) | unidentified transmembrane protein | polymer | 23 | 1652.8 | 1 | Thermosynechococcus vulcanus | ||
| 15 | IB, O (l, a) | 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL | non-polymer | 795.1 | 2 | Chemie (SQD) PubChem (25147486) PubChem (25235342) PubChem (42607399) PubChem (159321) PubChem (481096) PubChem (5459390) PubChem (102201395) PubChem (134765349) PubChem (9810997) PubChem (9918745) PubChem (10219110) PubChem (10373133) PubChem (14463145) | |||
| 16 | AA, BA, CA, DA, EA... (b, a, d) | CHLOROPHYLL A | non-polymer | 893.5 | 22 | Chemie (CLA) | |||
| 17 | R, S (a) | PHEOPHYTIN A | non-polymer | 871.2 | 2 | Chemie (PHO) | |||
| 18 | AB, HB, NA, OA, PA... (d, h, b, a) | BETA-CAROTENE | non-polymer | 536.9 | 6 | Chemie (BCR) PubChem (573) PubChem (21672398) PubChem (176490061) PubChem (177696266) PubChem (46783370) PubChem (46846294) PubChem (54603957) PubChem (54612003) PubChem (86765360) PubChem (5315709) PubChem (5280489) PubChem (91827292) PubChem (92863345) PubChem (5353436) PubChem (5356616) PubChem (5927371) PubChem (124919640) PubChem (92863346) PubChem (92863347) PubChem (92863348) PubChem (6477957) PubChem (100990628) PubChem (101525094) PubChem (101525095) PubChem (9828626) PubChem (10256668) PubChem (12305639) PubChem (12305640) PubChem (12305642) PubChem (12305644) PubChem (12305647) PubChem (12305652) PubChem (146673260) PubChem (152743364) PubChem (124919639) PubChem (160505766) PubChem (129651951) PubChem (132274419) PubChem (145925599) PubChem (159562859) PubChem (172654026) PubChem (172878405) PubChem (173398668) | |||
| 19 | V (a) | CHLORIDE ION | non-polymer | 35.5 | 1 | Chemie (CL) PubChem (312) | |||
| 20 | BB, CB, DB, JB, QA... (d, m, b, a) | (1S)-2-(ALPHA-L-ALLOPYRANOSYLOXY)-1-[(TRIDECANOYLOXY)METHYL]ETHYL PALMITATE | non-polymer | 689.0 | 7 | Chemie (MGE) PubChem (45490018) PubChem (75117308) PubChem (5327038) PubChem (134729617) | |||
| 21 | LB, RA (x, b) | UNKNOWN LIGAND | non-polymer | 35.5 | 2 | Chemie (UNL) | |||
| 22 | KB, TA, VA (t, b, d) | DODECYL-BETA-D-MALTOSIDE | non-polymer | 510.6 | 3 | Chemie (LMT) | |||
| 23 | WA (d) | FE (II) ION | non-polymer | 55.8 | 1 | Chemie (FE2) PubChem (27284) | |||
| 24 | ZA (d) | 5-[(2E,6E,10E,14E,18E,22E)-3,7,11,15,19,23,27-HEPTAMETHYLOCTACOSA-2,6,10,14,18,22,26-HEPTAENYL]-2,3-DIMETHYLBENZO-1,4-QUINONE | non-polymer | 613.0 | 1 | Chemie (PQ9) PubChem (5459388) | |||
| 25 | EB (d) | heptyl 1-thio-beta-D-glucopyranoside | non-polymer | 294.4 | 1 | Chemie (HTG) PubChem (17754029) PubChem (22844385) PubChem (71317209) PubChem (561567) PubChem (656917) PubChem (135074) PubChem (95858610) PubChem (96361182) PubChem (96361183) PubChem (97041763) PubChem (101138253) PubChem (10979306) PubChem (11335391) PubChem (11392262) | |||
| 26 | FB (d) | DIGALACTOSYL DIACYL GLYCEROL (DGDG) | non-polymer | 949.3 | 1 | Chemie (DGD) PubChem (24865462) PubChem (24865463) PubChem (50904896) PubChem (53480668) PubChem (46936671) PubChem (448441) PubChem (447899) PubChem (4629344) PubChem (15991538) PubChem (154573294) PubChem (171123158) PubChem (134746152) PubChem (140529801) | |||
| 27 | GB (e) | PROTOPORPHYRIN IX CONTAINING FE | non-polymer | 616.5 | 1 | Chemie (HEM) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 14 |
| Total formula weight | 197722.6 | |
| Non-Polymers* | Number of molecules | 50 |
| Total formula weight | 35200.6 | |
| All* | Total formula weight | 232923.2 |
