7DW9
Cryo-EM structure of human V2 vasopressin receptor in complex with an Gs protein
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (R) | Vasopressin V2 receptor | polymer | 645 | 71063.7 | 1 | UniProt (P30518) Pfam (PF00001) | Homo sapiens (Human) | V2R,AVPR V2,Antidiuretic hormone receptor,Renal-type arginine vasopressin receptor |
| 2 | B (A) | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | polymer | 361 | 41879.5 | 1 | Pfam (PF00503) UniProt (by SIFTS) (P63092) UniProt (by SIFTS) (P63096) | Homo sapiens | |
| 3 | C (B) | Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 | polymer | 371 | 40227.0 | 1 | UniProt (P54311) Pfam (PF25391) | Rattus norvegicus (Rat) | Transducin beta chain 1 |
| 4 | D (Y) | Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 | polymer | 71 | 7861.1 | 1 | UniProt (P63212) Pfam (PF00631) | Bos taurus (Bovine) | G gamma-I |
| 5 | E (N) | Nanobody35 | polymer | 140 | 15343.0 | 1 | synthetic construct | ||
| 6 | F (S) | scFv16 | polymer | 247 | 26277.3 | 1 | synthetic construct | ||
| 7 | G (C) | CYS-TYR-PHE-GLN-ASN-CYS-PRO-ARG-GLY-NH2 | polymer | 10 | 1086.2 | 1 | Pfam (PF00220) UniProt (by SIFTS) (P01185) | Homo sapiens | |
| 8 | H, I, J (R) | CHOLESTEROL | non-polymer | 386.7 | 3 | Chemie (CLR) PubChem (16219173) PubChem (16758052) PubChem (304) PubChem (176980071) PubChem (40477506) PubChem (40557614) PubChem (42579431) PubChem (42579432) PubChem (18640088) PubChem (1715243) PubChem (1715244) PubChem (45044259) PubChem (23423981) PubChem (49853509) PubChem (50990013) PubChem (52934537) PubChem (56621683) PubChem (191463) PubChem (57915018) PubChem (57939063) PubChem (58428240) PubChem (58445498) PubChem (58663286) PubChem (368063) PubChem (369319) PubChem (44654663) PubChem (59450329) PubChem (59628412) PubChem (59965215) PubChem (71234641) PubChem (59993755) PubChem (60001463) PubChem (66634651) PubChem (68055877) PubChem (68166463) PubChem (68315613) PubChem (46937002) PubChem (70795838) PubChem (70797612) PubChem (70954610) PubChem (70957185) PubChem (71463909) PubChem (638019) PubChem (59274407) PubChem (1549081) PubChem (1553803) PubChem (68311425) PubChem (68311398) PubChem (143173313) PubChem (177156123) PubChem (89951918) PubChem (90224410) PubChem (5997) PubChem (5283629) PubChem (5284644) PubChem (1551269) PubChem (90070115) PubChem (91298236) PubChem (5315842) PubChem (117965027) PubChem (6432564) PubChem (6710666) PubChem (124146240) PubChem (7059399) PubChem (124897607) PubChem (124896959) PubChem (6419195) PubChem (10861996) PubChem (132837164) PubChem (101624109) PubChem (6994560) PubChem (7055705) PubChem (7055706) PubChem (7059398) PubChem (7059400) PubChem (7059635) PubChem (7103033) PubChem (7182477) PubChem (7182478) PubChem (11834483) PubChem (11888915) PubChem (11888914) PubChem (9909206) PubChem (10045721) PubChem (71168115) PubChem (10134774) PubChem (10293553) PubChem (71173031) PubChem (124225449) PubChem (138967089) PubChem (11003580) PubChem (11025495) PubChem (11058155) PubChem (139566851) PubChem (124429284) PubChem (11463329) PubChem (11868624) PubChem (11868625) PubChem (11869366) PubChem (11869367) PubChem (11869368) PubChem (11869369) PubChem (12120344) PubChem (12156156) PubChem (12303135) PubChem (12303148) PubChem (12303156) PubChem (12303159) PubChem (12303160) PubChem (15939944) PubChem (124909223) PubChem (124909224) PubChem (124909225) PubChem (171828367) PubChem (173516975) PubChem (130459183) PubChem (131992107) PubChem (139568882) PubChem (142983773) PubChem (144054483) PubChem (144209461) PubChem (144331236) PubChem (144808354) PubChem (145053568) PubChem (145157652) PubChem (145215073) PubChem (145230478) PubChem (146320991) PubChem (147857230) PubChem (154993519) PubChem (158603858) PubChem (162906452) PubChem (162906453) PubChem (162906454) PubChem (162906455) PubChem (162906456) PubChem (162906457) PubChem (163255768) PubChem (163389210) PubChem (164665303) PubChem (166553771) PubChem (166712004) PubChem (170116175) PubChem (171764280) PubChem (171817101) PubChem (171817104) PubChem (174285573) |
Sequence modifications
R: 1 - 371 (UniProt: P30518)
B: 2 - 340 (UniProt: P54311)
| PDB | External Database | Details |
|---|---|---|
| His -115 | - | expression tag |
| His -114 | - | expression tag |
| His -113 | - | expression tag |
| His -112 | - | expression tag |
| His -111 | - | expression tag |
| His -110 | - | expression tag |
| His -109 | - | expression tag |
| His -108 | - | expression tag |
| His -107 | - | expression tag |
| His -106 | - | expression tag |
| Ala -105 | - | expression tag |
| Asp -104 | - | expression tag |
| Leu -103 | - | expression tag |
| Glu -102 | - | expression tag |
| Asp -101 | - | expression tag |
| Asn -100 | - | expression tag |
| Trp -99 | - | expression tag |
| Glu -98 | - | expression tag |
| Thr -97 | - | expression tag |
| Leu -96 | - | expression tag |
| Asn -95 | - | expression tag |
| Asp -94 | - | expression tag |
| Asn -93 | - | expression tag |
| Leu -92 | - | expression tag |
| Lys -91 | - | expression tag |
| Val -90 | - | expression tag |
| Ile -89 | - | expression tag |
| Glu -88 | - | expression tag |
| Lys -87 | - | expression tag |
| Ala -86 | - | expression tag |
| Asp -85 | - | expression tag |
| Asn -84 | - | expression tag |
| Ala -83 | - | expression tag |
| Ala -82 | - | expression tag |
| Gln -81 | - | expression tag |
| Val -80 | - | expression tag |
| Lys -79 | - | expression tag |
| Asp -78 | - | expression tag |
| Ala -77 | - | expression tag |
| Leu -76 | - | expression tag |
| Thr -75 | - | expression tag |
| Lys -74 | - | expression tag |
| Met -73 | - | expression tag |
| Arg -72 | - | expression tag |
| Ala -71 | - | expression tag |
| Ala -70 | - | expression tag |
| Ala -69 | - | expression tag |
| Leu -68 | - | expression tag |
| Asp -67 | - | expression tag |
| Ala -66 | - | expression tag |
| Gln -65 | - | expression tag |
| Lys -64 | - | expression tag |
| Ala -63 | - | expression tag |
| Thr -62 | - | expression tag |
| Pro -61 | - | expression tag |
| Pro -60 | - | expression tag |
| Lys -59 | - | expression tag |
| Leu -58 | - | expression tag |
| Glu -57 | - | expression tag |
| Asp -56 | - | expression tag |
| Lys -55 | - | expression tag |
| Ser -54 | - | expression tag |
| Pro -53 | - | expression tag |
| Asp -52 | - | expression tag |
| Ser -51 | - | expression tag |
| Pro -50 | - | expression tag |
| Glu -49 | - | expression tag |
| Met -48 | - | expression tag |
| Lys -47 | - | expression tag |
| Asp -46 | - | expression tag |
| Phe -45 | - | expression tag |
| Arg -44 | - | expression tag |
| His -43 | - | expression tag |
| Gly -42 | - | expression tag |
| Phe -41 | - | expression tag |
| Asp -40 | - | expression tag |
| Ile -39 | - | expression tag |
| Leu -38 | - | expression tag |
| Val -37 | - | expression tag |
| Gly -36 | - | expression tag |
| Gln -35 | - | expression tag |
| Ile -34 | - | expression tag |
| Asp -33 | - | expression tag |
| Asp -32 | - | expression tag |
| Ala -31 | - | expression tag |
| Leu -30 | - | expression tag |
| Lys -29 | - | expression tag |
| Leu -28 | - | expression tag |
| Ala -27 | - | expression tag |
| Asn -26 | - | expression tag |
| Glu -25 | - | expression tag |
| Gly -24 | - | expression tag |
| Lys -23 | - | expression tag |
| Val -22 | - | expression tag |
| Lys -21 | - | expression tag |
| Glu -20 | - | expression tag |
| Ala -19 | - | expression tag |
| Gln -18 | - | expression tag |
| Ala -17 | - | expression tag |
| Ala -16 | - | expression tag |
| Ala -15 | - | expression tag |
| Glu -14 | - | expression tag |
| Gln -13 | - | expression tag |
| Leu -12 | - | expression tag |
| Lys -11 | - | expression tag |
| Thr -10 | - | expression tag |
| Thr -9 | - | expression tag |
| Arg -8 | - | expression tag |
| Asn -7 | - | expression tag |
| Ala -6 | - | expression tag |
| Tyr -5 | - | expression tag |
| Ile -4 | - | expression tag |
| Gln -3 | - | expression tag |
| Lys -2 | - | expression tag |
| Tyr -1 | - | expression tag |
| Leu 0 | - | expression tag |
| Val 372 | - | expression tag |
| Phe 373 | - | expression tag |
| Thr 374 | - | expression tag |
| Leu 375 | - | expression tag |
| Glu 376 | - | expression tag |
| Asp 377 | - | expression tag |
| Phe 378 | - | expression tag |
| Val 379 | - | expression tag |
| Gly 380 | - | expression tag |
| Asp 381 | - | expression tag |
| Trp 382 | - | expression tag |
| Glu 383 | - | expression tag |
| Gln 384 | - | expression tag |
| Thr 385 | - | expression tag |
| Ala 386 | - | expression tag |
| Ala 387 | - | expression tag |
| Tyr 388 | - | expression tag |
| Asn 389 | - | expression tag |
| Leu 390 | - | expression tag |
| Asp 391 | - | expression tag |
| Gln 392 | - | expression tag |
| Val 393 | - | expression tag |
| Leu 394 | - | expression tag |
| Glu 395 | - | expression tag |
| Gln 396 | - | expression tag |
| Gly 397 | - | expression tag |
| Gly 398 | - | expression tag |
| Val 399 | - | expression tag |
| Ser 400 | - | expression tag |
| Ser 401 | - | expression tag |
| Leu 402 | - | expression tag |
| Leu 403 | - | expression tag |
| Gln 404 | - | expression tag |
| Asn 405 | - | expression tag |
| Leu 406 | - | expression tag |
| Ala 407 | - | expression tag |
| Val 408 | - | expression tag |
| Ser 409 | - | expression tag |
| Val 410 | - | expression tag |
| Thr 411 | - | expression tag |
| Pro 412 | - | expression tag |
| Ile 413 | - | expression tag |
| Gln 414 | - | expression tag |
| Arg 415 | - | expression tag |
| Ile 416 | - | expression tag |
| Val 417 | - | expression tag |
| Arg 418 | - | expression tag |
| Ser 419 | - | expression tag |
| Gly 420 | - | expression tag |
| Glu 421 | - | expression tag |
| Asn 422 | - | expression tag |
| Ala 423 | - | expression tag |
| Leu 424 | - | expression tag |
| Lys 425 | - | expression tag |
| Ile 426 | - | expression tag |
| Asp 427 | - | expression tag |
| Ile 428 | - | expression tag |
| His 429 | - | expression tag |
| Val 430 | - | expression tag |
| Ile 431 | - | expression tag |
| Ile 432 | - | expression tag |
| Pro 433 | - | expression tag |
| Tyr 434 | - | expression tag |
| Glu 435 | - | expression tag |
| Gly 436 | - | expression tag |
| Leu 437 | - | expression tag |
| Ser 438 | - | expression tag |
| Ala 439 | - | expression tag |
| Asp 440 | - | expression tag |
| Gln 441 | - | expression tag |
| Met 442 | - | expression tag |
| Ala 443 | - | expression tag |
| Gln 444 | - | expression tag |
| Ile 445 | - | expression tag |
| Glu 446 | - | expression tag |
| Glu 447 | - | expression tag |
| Val 448 | - | expression tag |
| Phe 449 | - | expression tag |
| Lys 450 | - | expression tag |
| Val 451 | - | expression tag |
| Val 452 | - | expression tag |
| Tyr 453 | - | expression tag |
| Pro 454 | - | expression tag |
| Val 455 | - | expression tag |
| Asp 456 | - | expression tag |
| Asp 457 | - | expression tag |
| His 458 | - | expression tag |
| His 459 | - | expression tag |
| Phe 460 | - | expression tag |
| Lys 461 | - | expression tag |
| Val 462 | - | expression tag |
| Ile 463 | - | expression tag |
| Leu 464 | - | expression tag |
| Pro 465 | - | expression tag |
| Tyr 466 | - | expression tag |
| Gly 467 | - | expression tag |
| Thr 468 | - | expression tag |
| Leu 469 | - | expression tag |
| Val 470 | - | expression tag |
| Ile 471 | - | expression tag |
| Asp 472 | - | expression tag |
| Gly 473 | - | expression tag |
| Val 474 | - | expression tag |
| Thr 475 | - | expression tag |
| Pro 476 | - | expression tag |
| Asn 477 | - | expression tag |
| Met 478 | - | expression tag |
| Leu 479 | - | expression tag |
| Asn 480 | - | expression tag |
| Tyr 481 | - | expression tag |
| Phe 482 | - | expression tag |
| Gly 483 | - | expression tag |
| Arg 484 | - | expression tag |
| Pro 485 | - | expression tag |
| Tyr 486 | - | expression tag |
| Glu 487 | - | expression tag |
| Gly 488 | - | expression tag |
| Ile 489 | - | expression tag |
| Ala 490 | - | expression tag |
| Val 491 | - | expression tag |
| Phe 492 | - | expression tag |
| Asp 493 | - | expression tag |
| Gly 494 | - | expression tag |
| Lys 495 | - | expression tag |
| Lys 496 | - | expression tag |
| Ile 497 | - | expression tag |
| Thr 498 | - | expression tag |
| Val 499 | - | expression tag |
| Thr 500 | - | expression tag |
| Gly 501 | - | expression tag |
| Thr 502 | - | expression tag |
| Leu 503 | - | expression tag |
| Trp 504 | - | expression tag |
| Asn 505 | - | expression tag |
| Gly 506 | - | expression tag |
| Asn 507 | - | expression tag |
| Lys 508 | - | expression tag |
| Ile 509 | - | expression tag |
| Ile 510 | - | expression tag |
| Asp 511 | - | expression tag |
| Glu 512 | - | expression tag |
| Arg 513 | - | expression tag |
| Leu 514 | - | expression tag |
| Ile 515 | - | expression tag |
| Thr 516 | - | expression tag |
| Pro 517 | - | expression tag |
| Asp 518 | - | expression tag |
| Gly 519 | - | expression tag |
| Ser 520 | - | expression tag |
| Met 521 | - | expression tag |
| Leu 522 | - | expression tag |
| Phe 523 | - | expression tag |
| Arg 524 | - | expression tag |
| Val 525 | - | expression tag |
| Thr 526 | - | expression tag |
| Ile 527 | - | expression tag |
| Asn 528 | - | expression tag |
| Ser 529 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Met -4 | - | initiating methionine |
| Gly -3 | - | expression tag |
| Ser -2 | - | expression tag |
| Leu -1 | - | expression tag |
| Leu 0 | - | expression tag |
| Gln 1 | - | expression tag |
| Gly 341 | - | expression tag |
| Ser 342 | - | expression tag |
| Ser 343 | - | expression tag |
| Gly 344 | - | expression tag |
| Gly 345 | - | expression tag |
| Gly 346 | - | expression tag |
| Gly 347 | - | expression tag |
| Ser 348 | - | expression tag |
| Gly 349 | - | expression tag |
| Gly 350 | - | expression tag |
| Gly 351 | - | expression tag |
| Gly 352 | - | expression tag |
| Ser 353 | - | expression tag |
| Ser 354 | - | expression tag |
| Gly 355 | - | expression tag |
| Val 356 | - | expression tag |
| Ser 357 | - | expression tag |
| Gly 358 | - | expression tag |
| Trp 359 | - | expression tag |
| Arg 360 | - | expression tag |
| Leu 361 | - | expression tag |
| Phe 362 | - | expression tag |
| Lys 363 | - | expression tag |
| Lys 364 | - | expression tag |
| Ile 365 | - | expression tag |
| Ser 366 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 7 |
| Total formula weight | 203737.9 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 1160.0 | |
| All* | Total formula weight | 204897.8 |






