7DQD
Crystal structure of the AMP-PNP-bound mutant A(S23C)3B(N64C)3 complex from enterococcus hirae V-ATPase
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, G, H... (A, B, C, I, J...) | V-type sodium ATPase catalytic subunit A | polymer | 600 | 66363.9 | 6 | UniProt (Q08636) Pfam (PF02874) Pfam (PF16886) Pfam (PF00006) Pfam (PF22919) | Enterococcus hirae (strain ATCC 9790 / DSM 20160 / JCM 8729 / LMG 6399 / NBRC 3181 / NCIMB 6459 / NCDO 1258) | Na(+)-translocating ATPase subunit A,V-type sodium pump catalytic subunit A |
| 2 | D, E, F, J, K... (D, E, F, L, M...) | V-type sodium ATPase subunit B | polymer | 465 | 51709.9 | 6 | UniProt (Q08637) Pfam (PF02874) Pfam (PF00006) Pfam (PF22919) | Enterococcus hirae (strain ATCC 9790 / DSM 20160 / JCM 8729 / LMG 6399 / NBRC 3181 / NCIMB 6459 / NCDO 1258) | Na(+)-translocating ATPase subunit B,V-type sodium pump subunit B |
| 3 | M (A) | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
| 4 | N, P, R, T (B, C, J, K) | PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | non-polymer | 506.2 | 4 | Chemie (ANP) | |||
| 5 | O, Q, S, U (B, C, J, K) | MAGNESIUM ION | non-polymer | 24.3 | 4 | Chemie (MG) | |||
| 6 | AA, BA, CA, V, W... (L, M, N, A, B...) | water | water | 18.0 | 12 | Chemie (HOH) |
Sequence modifications
A, B, C, I, J, K: 1 - 593 (UniProt: Q08636)
D, E, F, L, M, N: 1 - 458 (UniProt: Q08637)
| PDB | External Database | Details |
|---|---|---|
| Gly -6 | - | expression tag |
| Ser -5 | - | expression tag |
| Ser -4 | - | expression tag |
| Gly -3 | - | expression tag |
| Ser -2 | - | expression tag |
| Ser -1 | - | expression tag |
| Gly 0 | - | expression tag |
| Cys 23 | Ser 23 | engineered mutation |
| PDB | External Database | Details |
|---|---|---|
| Gly -6 | - | expression tag |
| Ser -5 | - | expression tag |
| Ser -4 | - | expression tag |
| Gly -3 | - | expression tag |
| Ser -2 | - | expression tag |
| Ser -1 | - | expression tag |
| Gly 0 | - | expression tag |
| Cys 64 | Asn 64 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 12 |
| Total formula weight | 708442.8 | |
| Non-Polymers* | Number of molecules | 9 |
| Total formula weight | 2214.1 | |
| All* | Total formula weight | 710656.9 |
