7DKJ
Hemagglutinin Influenza A virus (A/Okuda/1957(H2N2) bound with a neutralizing antibody
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, E, I | Hemagglutinin | polymer | 599 | 67423.8 | 3 | UniProt (A0A0A7E4R0) Pfam (PF00509) In PDB | Influenza A virus (A/Okuda/1957(H2N2)) | |
2 | C, G, K | Fv-clasp heavy chain | polymer | 203 | 23083.9 | 3 | Mus musculus | ||
3 | D, H, L | Fv-clasp light chain | polymer | 189 | 21287.7 | 3 | Mus musculus | ||
4 | B, F, J, M, N... | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 6 | In PDB GlyTouCan (G15407YE) | |||
5 | A, E, I | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 9 | Chemie (NAG) |
Sequence modifications
A, E, I: 3 - 503 (UniProt: A0A0A7E4R0)
PDB | External Database | Details |
---|---|---|
Met -35 | - | initiating methionine |
Leu -34 | - | expression tag |
Leu -33 | - | expression tag |
Val -32 | - | expression tag |
Asn -31 | - | expression tag |
Gln -30 | - | expression tag |
Ser -29 | - | expression tag |
His -28 | - | expression tag |
Gln -27 | - | expression tag |
Gly -26 | - | expression tag |
Phe -25 | - | expression tag |
Asn -24 | - | expression tag |
Lys -23 | - | expression tag |
Glu -22 | - | expression tag |
His -21 | - | expression tag |
Thr -20 | - | expression tag |
Ser -19 | - | expression tag |
Lys -18 | - | expression tag |
Met -17 | - | expression tag |
Val -16 | - | expression tag |
Ser -15 | - | expression tag |
Ala -14 | - | expression tag |
Ile -13 | - | expression tag |
Val -12 | - | expression tag |
Leu -11 | - | expression tag |
Tyr -10 | - | expression tag |
Val -9 | - | expression tag |
Leu -8 | - | expression tag |
Leu -7 | - | expression tag |
Ala -6 | - | expression tag |
Ala -5 | - | expression tag |
Ala -4 | - | expression tag |
Ala -3 | - | expression tag |
His -2 | - | expression tag |
Ser -1 | - | expression tag |
Ala 0 | - | expression tag |
Phe 1 | - | expression tag |
Ala 2 | - | expression tag |
Cys 22 | Leu 35 | engineered mutation |
Phe 93 | Tyr 106 | engineered mutation |
Ser 98 | Asn 111 | engineered mutation |
Cys 374 | Gly 387 | engineered mutation |
Leu 504 | - | expression tag |
Val 505 | - | expression tag |
Pro 506 | - | expression tag |
Arg 507 | - | expression tag |
Gly 508 | - | expression tag |
Ser 509 | - | expression tag |
Pro 510 | - | expression tag |
Gly 511 | - | expression tag |
Ser 512 | - | expression tag |
Gly 513 | - | expression tag |
Tyr 514 | - | expression tag |
Ile 515 | - | expression tag |
Pro 516 | - | expression tag |
Glu 517 | - | expression tag |
Ala 518 | - | expression tag |
Pro 519 | - | expression tag |
Arg 520 | - | expression tag |
Asp 521 | - | expression tag |
Gly 522 | - | expression tag |
Gln 523 | - | expression tag |
Ala 524 | - | expression tag |
Tyr 525 | - | expression tag |
Val 526 | - | expression tag |
Arg 527 | - | expression tag |
Lys 528 | - | expression tag |
Asp 529 | - | expression tag |
Gly 530 | - | expression tag |
Glu 531 | - | expression tag |
Trp 532 | - | expression tag |
Val 533 | - | expression tag |
Leu 534 | - | expression tag |
Leu 535 | - | expression tag |
Ser 536 | - | expression tag |
Thr 537 | - | expression tag |
Phe 538 | - | expression tag |
Leu 539 | - | expression tag |
Gly 540 | - | expression tag |
Ser 541 | - | expression tag |
Gly 542 | - | expression tag |
Leu 543 | - | expression tag |
Asn 544 | - | expression tag |
Asp 545 | - | expression tag |
Ile 546 | - | expression tag |
Phe 547 | - | expression tag |
Glu 548 | - | expression tag |
Ala 549 | - | expression tag |
Gln 550 | - | expression tag |
Lys 551 | - | expression tag |
Ile 552 | - | expression tag |
Glu 553 | - | expression tag |
Trp 554 | - | expression tag |
His 555 | - | expression tag |
Glu 556 | - | expression tag |
Gly 557 | - | expression tag |
His 558 | - | expression tag |
His 559 | - | expression tag |
His 560 | - | expression tag |
His 561 | - | expression tag |
His 562 | - | expression tag |
His 563 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 9 |
Total formula weight | 335386.3 | |
Branched | Number of molecules | 6 |
Total formula weight | 3519.3 | |
Non-Polymers* | Number of molecules | 9 |
Total formula weight | 1990.9 | |
All* | Total formula weight | 340896.4 |