7DEU
Crystal structure of SARS-CoV-2 RBD in complex with a neutralizing antibody scFv
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Spike protein S1 | polymer | 206 | 23159.9 | 1 | UniProt (P0DTC2) Pfam (PF09408) | Severe acute respiratory syndrome coronavirus 2 (2019-nCoV SARS-CoV-2) | |
| 2 | B (B) | antibody scFv | polymer | 253 | 27374.0 | 1 | Mus musculus | ||
| 3 | C (A) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) | |||
| 4 | D, E (A, B) | water | water | 18.0 | 229 | Chemie (HOH) |
Sequence modifications
A: 334 - 530 (UniProt: P0DTC2)
| PDB | External Database | Details |
|---|---|---|
| Ala 531 | - | expression tag |
| Ala 532 | - | expression tag |
| Ala 533 | - | expression tag |
| His 534 | - | expression tag |
| His 535 | - | expression tag |
| His 536 | - | expression tag |
| His 537 | - | expression tag |
| His 538 | - | expression tag |
| His 539 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 50534.0 | |
| Non-Polymers* | Number of molecules | 1 |
| Total formula weight | 221.2 | |
| All* | Total formula weight | 50755.2 |
