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7DEO

Crystal structure of SARS-CoV-2 RBD in complex with a neutralizing antibody scFv

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, Cantibody scFvpolymer25927654.72Homo sapiens
2B, DSpike protein S1polymer20623159.92UniProt (P0DTC2)
Pfam (PF09408)
In PDB
Severe acute respiratory syndrome coronavirus 2 (2019-nCoV SARS-CoV-2)
3A, CCALCIUM IONnon-polymer40.12Chemie (CA)
4B, D2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.22Chemie (NAG)
5waterwater18.0325Chemie (HOH)
Sequence modifications
B, D: 334 - 530 (UniProt: P0DTC2)
PDBExternal DatabaseDetails
Ala 531-expression tag
Ala 532-expression tag
Ala 533-expression tag
His 534-expression tag
His 535-expression tag
His 536-expression tag
His 537-expression tag
His 538-expression tag
His 539-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight101629.2
Non-Polymers*Number of molecules4
Total formula weight522.6
All*Total formula weight102151.8
*Water molecules are not included.

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PDB entries from 2024-08-14

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