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7D0D

S protein of SARS-CoV-2 in complex bound with P5A-3C12_2B

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, C, BSpike glycoproteinpolymer1283142502.63UniProt (P0DTC2)
Pfam (PF16451)
Pfam (PF09408)
Pfam (PF19209)
Pfam (PF01601)
In PDB
Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)S glycoprotein,E2,Peplomer protein
2H, GHeavy chain of P5A-3C12polymer22624203.32Homo sapiens (Human)
3L, FLight chain of P5A-3C12polymer22024268.92Homo sapiens (Human)
4a, b, c, D, E...2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched424.422In PDB
GlyTouCan (G42666HT)
5B, A, C2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.226Chemie (NAG)
Sequence modifications
A, C, B: 1 - 1273 (UniProt: P0DTC2)
PDBExternal DatabaseDetails
Pro 986Lys 986engineered mutation
Pro 987Val 987engineered mutation
Leu 1274-expression tag
Glu 1275-expression tag
Asp 1276-expression tag
Tyr 1277-expression tag
Lys 1278-expression tag
Asp 1279-expression tag
Asp 1280-expression tag
Asp 1281-expression tag
Asp 1282-expression tag
Lys 1283-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains7
Total formula weight524452.1
BranchedNumber of molecules22
Total formula weight9336.8
Non-Polymers*Number of molecules26
Total formula weight5751.4
All*Total formula weight539540.3
*Water molecules are not included.

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PDB entries from 2024-06-12

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