7D0C
S protein of SARS-CoV-2 in complex bound with P5A-3A1
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C | Spike glycoprotein | polymer | 1283 | 142502.6 | 3 | UniProt (P0DTC2) Pfam (PF16451) Pfam (PF09408) Pfam (PF19209) Pfam (PF01601) In PDB | Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) | S glycoprotein,E2,Peplomer protein |
2 | H, G | Heavy chain of P5A-3A1 | polymer | 219 | 23306.0 | 2 | Homo sapiens (Human) | ||
3 | L, F | Light chain of P5A-3A1 | polymer | 215 | 23432.0 | 2 | Homo sapiens (Human) | ||
4 | a, b, c, D, E... | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 22 | In PDB GlyTouCan (G42666HT) | |||
5 | C, A, B | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 26 | Chemie (NAG) |
Sequence modifications
A, B, C: 1 - 1273 (UniProt: P0DTC2)
PDB | External Database | Details |
---|---|---|
Pro 986 | Lys 986 | engineered mutation |
Pro 987 | Val 987 | engineered mutation |
Leu 1274 | - | expression tag |
Glu 1275 | - | expression tag |
Asp 1276 | - | expression tag |
Tyr 1277 | - | expression tag |
Lys 1278 | - | expression tag |
Asp 1279 | - | expression tag |
Asp 1280 | - | expression tag |
Asp 1281 | - | expression tag |
Asp 1282 | - | expression tag |
Lys 1283 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 7 |
Total formula weight | 520983.6 | |
Branched | Number of molecules | 22 |
Total formula weight | 9336.8 | |
Non-Polymers* | Number of molecules | 26 |
Total formula weight | 5751.4 | |
All* | Total formula weight | 536071.9 |