7CZU

S protein of SARS-CoV-2 in complex bound with P5A-1B6_2B

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A, B, C	Spike glycoprotein	polymer	1283	142502.6	3	UniProt (P0DTC2) Pfam (PF16451) Pfam (PF09408) Pfam (PF19209) Pfam (PF01601) In PDB	Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)	S glycoprotein,E2,Peplomer protein
2	J, H	Immunoglobulin heavy variable 3-30-3,Immunoglobulin heavy variable 3-30-3,Chain H of P5A-1B6_2B,Immunoglobulin gamma-1 heavy chain,Immunoglobulin gamma-1 heavy chain	polymer	457	49987.3	2	UniProt (P0DP02) UniProt (P0DOX5) Pfam (PF07686) Pfam (PF07654) In PDB	Homo sapiens (Human)	Immunoglobulin gamma-1 heavy chain NIE
3	N, K	Immunoglobulin kappa variable 1-33,Immunoglobulin kappa variable 1-33,Uncharacterized protein	polymer	214	23543.0	2	UniProt (P01594) UniProt (Q8TCD0) Pfam (PF07654) Pfam (PF07686) In PDB	Homo sapiens (Human)	Ig kappa chain V-I region AU,Ig kappa chain V-I region Ka
4	a, b, D, E, F...	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	branched		424.4	21	In PDB GlyTouCan (G42666HT)
5	C, A, B	2-acetamido-2-deoxy-beta-D-glucopyranose	non-polymer		221.2	28	Chemie (NAG)

Sequence modifications

A, B, C: 1 - 1273 (UniProt: P0DTC2)

J, H: 1 - 97 (UniProt: P0DP02)
J, H: 98 - 116 (PDB: 7CZU)
J, H: 117 - 457 (UniProt: P0DOX5)
N, K: 1 - 95 (UniProt: P01594)

PDB	External Database	Details
Tyr 96	-	linker

N, K: 97 - 214 (UniProt: Q8TCD0)

Sequence viewer

Contents of the asymmetric unit

*Water molecules are not included.